RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 BTN3A2P78410 334 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 SPIN4Q56A73 249 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 ABHD13Q7L211 337 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 METTL4Q8N3J2 472 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 AMER3Q8N944 861 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 TTC29Q8NA56 475 aaPredicted RBP18.42■□□□□ 0.54
USP39-218ENST00000493829 CCDC197Q8NCU1 140 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 CLHC1Q8NHS4 586 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 CHTF18Q8WVB6 975 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 PMEPA1Q969W9 287 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 TEFMQ96QE5 360 aaKnown RBP18.42■□□□□ 0.54
USP39-218ENST00000493829 CMKLR1Q99788 373 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 COPS7BQ9H9Q2 264 aaPredicted RBP18.42■□□□□ 0.54
USP39-218ENST00000493829 AKAP7Q9P0M2 348 aaPredicted RBP18.42■□□□□ 0.54
USP39-218ENST00000493829 SERTAD3Q9UJW9 196 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 RARRES3Q9UL19 164 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 ARL2BPQ9Y2Y0 163 aa18.42■□□□□ 0.54
USP39-218ENST00000493829 PCNX2A6NKB5 2137 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 HYKKA2RU49 373 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 DCDC2BA2VCK2 349 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 PCDH7O60245 1069 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 DKK1O94907 266 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 SEMA3DO95025 777 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 PRPH2P23942 346 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 RAE1P78406 368 aaKnown RBP18.41■□□□□ 0.54
USP39-218ENST00000493829 GRM7Q14831 915 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 IL23RQ5VWK5 629 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 ABHD17CQ6PCB6 329 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 ZNF793Q6ZN11 406 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 LIX1Q8N485 282 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 KCNC2Q96PR1 638 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 ZNF717Q9BY31 904 aaPredicted RBP18.41■□□□□ 0.54
USP39-218ENST00000493829 GNG14A0A1W2PPG7 69 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 URADA6NGE7 173 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 H3BMH7 237 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 TXNDC9O14530 226 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 UBDO15205 165 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 TIAF1O95411 115 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 CDK4P11802 303 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 TIA1P31483 386 aaKnown RBP eCLIP18.41■□□□□ 0.54
USP39-218ENST00000493829 BSGP35613 385 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 MAPK10P53779 464 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 OLR1P78380 273 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 TGM3Q08188 693 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 KIAA0040Q15053 153 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 OR4C11Q6IEV9 310 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 NOXRED1Q6NXP6 359 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 RAB11FIP2Q7L804 512 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 NUDT13Q86X67 352 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 TMEM126BQ8IUX1 230 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 CACNA2D3Q8IZS8 1091 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 BMPERQ8N8U9 685 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 AHSPQ9NZD4 102 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 DHCR7Q9UBM7 475 aaKnown RBP18.41■□□□□ 0.54
USP39-218ENST00000493829 PISDQ9UG56 409 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 NDOR1Q9UHB4 597 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 NAALAD2Q9Y3Q0 740 aa18.41■□□□□ 0.54
USP39-218ENST00000493829 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 A0A0A6YYC8 382 aaPredicted RBP18.4■□□□□ 0.54
USP39-218ENST00000493829 ARHGAP10A1A4S6 786 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 I3L1I5 382 aaPredicted RBP18.4■□□□□ 0.54
USP39-218ENST00000493829 ZNF749O43361 778 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 MYO1DO94832 1006 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 MSL3P1P0C860 447 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 ALOX12P18054 663 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 ETV5P41161 510 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 UBAP2LQ14157 1087 aaKnown RBP18.4■□□□□ 0.54
USP39-218ENST00000493829 C3orf38Q5JPI3 329 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 CCNYL2Q5T2Q4 361 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 TTLL10Q6ZVT0 673 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 PDSS2Q86YH6 399 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 ARHGEF39Q8N4T4 335 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 OR9A4Q8NGU2 314 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 NDC1Q9BTX1 674 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 SLC7A5P2Q9GIP4 190 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 CUTCQ9NTM9 273 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 NOP53Q9NZM5 478 aaKnown RBP18.4■□□□□ 0.54
USP39-218ENST00000493829 BAIAP2L1Q9UHR4 511 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 TRIM33Q9UPN9 1127 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 EIF3LQ9Y262 564 aaKnown RBP18.4■□□□□ 0.54
USP39-218ENST00000493829 CFAP54Q96N23 3096 aa18.4■□□□□ 0.54
USP39-218ENST00000493829 KIF26BQ2KJY2 2108 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 NPIPB8E9PQR5 432 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 SGK494L7N484 410 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 KLHL18O94889 574 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 ANXA4P09525 319 aaPredicted RBP18.39■□□□□ 0.53
USP39-218ENST00000493829 G6PDP11413 515 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 SDC1P18827 310 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 TACR1P25103 407 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 TPP2P29144 1249 aaPredicted RBP18.39■□□□□ 0.53
USP39-218ENST00000493829 EMX2Q04743 252 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 TARDBPQ13148 414 aaKnown RBP eCLIP18.39■□□□□ 0.53
USP39-218ENST00000493829 PTGR1Q14914 329 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 NDUFA9Q16795 377 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 C1orf189Q5VU69 101 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 OGFOD2Q6N063 350 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 PWWP2BQ6NUJ5 590 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 SPATA19Q7Z5L4 167 aa18.39■□□□□ 0.53
USP39-218ENST00000493829 MTDHQ86UE4 582 aaKnown RBP18.39■□□□□ 0.53
USP39-218ENST00000493829 PPP1R3BQ86XI6 285 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms