RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 IGKV3D-11A0A0A0MRZ8 115 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 FIGNL2A6NMB9 653 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 ACOT7O00154 380 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 CEP104O60308 925 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 PDE9AO76083 593 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 C8GP07360 202 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 CCR8P51685 355 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 GPR85P60893 370 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 OLR1P78380 273 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 RGS1Q08116 209 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 SP140Q13342 867 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 TERF2Q15554 542 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 CCNG2Q16589 344 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 ZNF549Q6P9A3 640 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 AGTRAPQ6RW13 159 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 STRA8Q7Z7C7 330 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 TBC1D19Q8N5T2 526 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 APCDD1LQ8NCL9 501 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 ABHD11Q8NFV4 315 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 CREB3L4Q8TEY5 395 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 SGPP1Q9BX95 441 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 FBXO6Q9NRD1 293 aaPredicted RBP16.48■□□□□ 0.23
NUP50-218ENST00000493456 SAMD15Q9P1V8 674 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 L3MBTL1Q9Y468 752 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 CAPN6Q9Y6Q1 641 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 FBN3Q75N90 2809 aa16.48■□□□□ 0.23
NUP50-218ENST00000493456 PRRC2AP48634 2157 aaKnown RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 TRBV11-1A0A0K0K1C0 115 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 OR14I1A6ND48 311 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 PSMD12O00232 456 aaPredicted RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 ITGA10O75578 1167 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 CTAG2O75638 210 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 FOSL1P15407 271 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 MAOAP21397 527 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 BTG2P78543 158 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 SARNPP82979 210 aaKnown RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 NAE1Q13564 534 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 THOC5Q13769 683 aaKnown RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 DHX34Q14147 1143 aaKnown RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 CASC4Q6P4E1 433 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 MDGA2Q7Z553 956 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 GPALPP1Q8IXQ4 340 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 PALM2Q8IXS6 379 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 B3GNT7Q8NFL0 401 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 OR4K1Q8NGD4 311 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 NT5CQ8TCD5 201 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 POLDIP3Q9BY77 421 aaKnown RBP16.47■□□□□ 0.23
NUP50-218ENST00000493456 ATG10Q9H0Y0 220 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 ZDHHC11Q9H8X9 412 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 PARVBQ9HBI1 364 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
NUP50-218ENST00000493456 ABCA4P78363 2273 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 TRBC2A0A5B9 178 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 TMEM200CA6NKL6 621 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 BCKDKO14874 412 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 OR1F1O43749 312 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 DNAJB6O75190 326 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ZNF888P0CJ79 500 aaPredicted RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 RNH1P13489 461 aaKnown RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 NPPBP16860 134 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ACVR2AP27037 513 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ZFP36L2P47974 494 aaKnown RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 SSR4P51571 173 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 PPIAP62937 165 aaKnown RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 FOXD4Q12950 439 aaPredicted RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 CTBP1Q13363 440 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 CEBPEQ15744 281 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 GXYLT1Q4G148 440 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 DENND6AQ8IWF6 608 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 LMNTD2Q8IXW0 634 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 PSD4Q8NDX1 1056 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 OR10Q1Q8NGQ4 319 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ALKBH8Q96BT7 664 aaKnown RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 RMND5BQ96G75 393 aaPredicted RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 ALPK1Q96QP1 1244 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 DEFB127Q9H1M4 99 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 DLL4Q9NR61 685 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 PNPLA3Q9NST1 481 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ADAMTS6Q9UKP5 1117 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 FBXW2Q9UKT8 454 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
NUP50-218ENST00000493456 YARS2Q9Y2Z4 477 aaKnown RBP16.46■□□□□ 0.23
NUP50-218ENST00000493456 MAGEB16A2A368 324 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 URADA6NGE7 173 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 A8MUA0 341 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 NPIPA2E9PIF3 369 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 NPIPA3F8WFD2 350 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SLC16A5O15375 505 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SERPIND1P05546 499 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 DNASE1P24855 282 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 PEX19P40855 299 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SLC1A2P43004 574 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 RGS4P49798 205 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 PLGLB1Q02325 96 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 SIX1Q15475 284 aaPredicted RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
NUP50-218ENST00000493456 SLC25A35Q3KQZ1 300 aa16.45■□□□□ 0.22
NUP50-218ENST00000493456 UGT3A1Q6NUS8 523 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms