RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FAM9CQ8IZT9 166 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 SLC15A4Q8N697 577 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CELF5Q8N6W0 485 aaKnown RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ZNF420Q8TAQ5 688 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 JPH3Q8WXH2 748 aaPredicted RBP11.93□□□□□ -0.5
HMGN1-220ENST00000492280 OR8D1Q8WZ84 308 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 PPCDCQ96CD2 204 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 F2RL3Q96RI0 385 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 ASPSCR1Q9BZE9 553 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 OSGEPL1Q9H4B0 414 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 XKR8Q9H6D3 395 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 SLAMF7Q9NQ25 335 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 RPS6KA6Q9UK32 745 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 HCN2Q9UL51 889 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 CDH7Q9ULB5 785 aa11.93□□□□□ -0.5
HMGN1-220ENST00000492280 IGLON5A6NGN9 336 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 NPIPB8E9PQR5 432 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 M0QX08 132 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 FAM20BO75063 409 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 TBX6O95947 436 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 BCL10O95999 233 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 CA3P07451 260 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 C1GALT1C1LP0DN25 315 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 ALPPL2P10696 532 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 P2RY2P41231 377 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 IDH2P48735 452 aaKnown RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 ITGA1P56199 1179 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SPIBQ01892 262 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 TMEM236Q5W0B7 351 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 TTC23LQ6PF05 361 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 LRRC56Q8IYG6 542 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 AMER3Q8N944 861 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 DNAJB8Q8NHS0 232 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 MIPOL1Q8TD10 442 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PROX1Q92786 737 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 MUL1Q969V5 352 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 RDH12Q96NR8 316 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 FEVQ99581 238 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 NIPSNAP1Q9BPW8 284 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 BRF2Q9HAW0 419 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PCDHGA10Q9Y5H3 936 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 MDC1Q14676 2089 aaKnown RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 H7BY64 318 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SLC16A6O15403 523 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 NME6O75414 186 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PAPLNO95428 1278 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 FURINP09958 794 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 ITGB7P26010 798 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 C21orf33P30042 268 aaPredicted RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SOX9P48436 509 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PRIM2P49643 509 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 NCS1P62166 190 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 RPP38P78345 283 aaKnown RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SCARB2Q14108 478 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SYT16Q17RD7 645 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PRAMEF14Q5SWL7 426 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PRAMEF13Q5VWM6 474 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 EGFLAMQ63HQ2 1017 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SLC5A8Q8N695 610 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 DNASE1L2Q92874 299 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 FGF13Q92913 245 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 RAB8BQ92930 207 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 DTNBP1Q96EV8 351 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 SLC6A17Q9H1V8 727 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 TRIT1Q9H3H1 467 aaKnown RBP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 DYRK4Q9NR20 520 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 NDUFAF4Q9P032 175 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 BLOC1S6Q9UL45 172 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 RAB23Q9ULC3 237 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGN1-220ENST00000492280 DOLKQ9UPQ8 538 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PLEKHM1Q9Y4G2 1056 aa11.92□□□□□ -0.5
HMGN1-220ENST00000492280 PRAMEF10O60809 474 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 NDUFS2O75306 463 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 WBP4O75554 376 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 PCDH8O95206 1070 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 SRPRAP08240 638 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ASMTP46597 345 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 EPS8Q12929 822 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 HSPB3Q12988 150 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MYBPC3Q14896 1274 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 EXOC3L2Q2M3D2 409 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 NXPE4Q6UWF7 544 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ADCK2Q7Z695 626 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 ANKRD53Q8N9V6 530 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 VPS37AQ8NEZ2 397 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 FAM81AQ8TBF8 368 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 APH1BQ8WW43 257 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 GTPBP3Q969Y2 492 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 CHFRQ96EP1 664 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MIEF1Q9NQG6 463 aa11.91□□□□□ -0.5
HMGN1-220ENST00000492280 MBNL1Q9NR56 388 aaKnown RBP11.91□□□□□ -0.5
HMGN1-220ENST00000492280 RAD18Q9NS91 495 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms