RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 PDK4Q16654 411 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 SFT2D3Q587I9 215 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 ABHD17BQ5VST6 288 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 RPUSD3Q6P087 351 aaKnown RBP25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 RELL1Q8IUW5 271 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 SNX31Q8N9S9 440 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 M1APQ8TC57 530 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 GAL3ST3Q96A11 431 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 ESAMQ96AP7 390 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 LPAR4Q99677 370 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 RNF32Q9H0A6 362 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 PLA2G3Q9NZ20 509 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 NUDT4Q9NZJ9 180 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 NTNG1Q9Y2I2 539 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 ACOT9Q9Y305 439 aa25.52■■□□□ 1.68
SH3GL3-204ENST00000492099 ESPL1Q14674 2120 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 PTPN13Q12923 2485 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 TRAV17A0A0B4J275 112 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 ANKDD1BA6NHY2 528 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 PSMD12O00232 456 aaPredicted RBP25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 RNH1P13489 461 aaKnown RBP25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 KCNC1P48547 511 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 DLG1Q12959 904 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 FBXO48Q5FWF7 155 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 OR1N1Q8NGS0 311 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 EXT2Q93063 718 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 PTCD3Q96EY7 689 aaKnown RBP25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 FAR2Q96K12 515 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 CD244Q9BZW8 370 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 STMN3Q9NZ72 180 aa25.51■■□□□ 1.67
SH3GL3-204ENST00000492099 COL12A1Q99715 3063 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 CCNT2O60583 730 aaKnown RBP25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 B4GALT2O60909 372 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 KERAO60938 352 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 CLEC3AO75596 197 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 AGFG2O95081 481 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 TNFSF10P50591 281 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 OR4D2P58180 307 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 EIF2S3LQ2VIR3 472 aaKnown RBP25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 GLE1Q53GS7 698 aaKnown RBP25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 XKR6Q5GH73 641 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 MROH9Q5TGP6 573 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 PAPD4Q6PIY7 484 aaKnown RBP25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 QSOX2Q6ZRP7 698 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 LRRC70Q7Z2Q7 622 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 CCT6BQ92526 530 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 TSLPQ969D9 159 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 WDR34Q96EX3 536 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 EFCAB11Q9BUY7 163 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 IGSF5Q9NSI5 407 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 DOPEY2Q9Y3R5 2298 aa25.5■■□□□ 1.67
SH3GL3-204ENST00000492099 A0A087X1B8 175 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 A0A088AWK7 358 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 CCDC189A1A4V9 331 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 LRIT2A6NDA9 550 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 KIF2AO00139 706 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 PRMT3O60678 531 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 WDPCPO95876 746 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 CTAGE8P0CG41 777 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 MYBL2P10244 700 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 ZNF10P21506 573 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 GMPRP36959 345 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 BTN3A2P78410 334 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 LAPTM5Q13571 262 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 ELOAQ14241 798 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 PAGE2BQ5JRK9 111 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 H3F3CQ6NXT2 135 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 CTAGE4Q8IX94 777 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 PRR7Q8TB68 274 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 GRHL3Q8TE85 626 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 MS4A6EQ96DS6 147 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 MRRFQ96E11 262 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 ZNF354BQ96LW1 612 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 PTCHD1Q96NR3 888 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 ATOH8Q96SQ7 321 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 NPLQ9BXD5 320 aaPredicted RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 AICDAQ9GZX7 198 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 KCNK13Q9HB14 408 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 MMP25Q9NPA2 562 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 NINJ2Q9NZG7 142 aa25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 DMGDHQ9UI17 866 aaKnown RBP25.49■■□□□ 1.67
SH3GL3-204ENST00000492099 ANKUB1A6NFN9 424 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 A8MUI8 341 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 SUPT3HB4E1H0 165 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 SUPT3HO75486 399 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 IRF8Q02556 426 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 ZNF33BQ06732 778 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 DOC2AQ14183 400 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 TBCCQ15814 346 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 HIST2H2ACQ16777 129 aaPredicted RBP25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 FAM83EQ2M2I3 478 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 HIST2H2AA3Q6FI13 130 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 AMER2Q8N7J2 671 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 NOA1Q8NC60 698 aaKnown RBP25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 FAR1Q8WVX9 515 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 NXNL1Q96CM4 212 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 ACSS3Q9H6R3 686 aa25.48■■□□□ 1.67
SH3GL3-204ENST00000492099 USP9XQ93008 2570 aaPredicted RBP25.47■■□□□ 1.67
SH3GL3-204ENST00000492099 SYCE1LA8MT33 242 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms