RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	PDK4	Q16654	411 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	BCL7A	Q4VC05	210 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ZCWPW2	Q504Y3	356 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SBK1	Q52WX2	424 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RARS2	Q5T160	578 aa	Known RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	OR52E8	Q6IFG1	317 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SULT1C3	Q6IMI6	304 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	FBXO42	Q6P3S6	717 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	TMEM65	Q6PI78	240 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	WDR88	Q6ZMY6	472 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	DCDC5	Q6ZRR9	648 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	TPGS1	Q6ZTW0	290 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	GPR142	Q7Z601	462 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ABI3BP	Q7Z7G0	1075 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PHLDB2	Q86SQ0	1253 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RTN4RL2	Q86UN3	420 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CUZD1	Q86UP6	607 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ADGRG3	Q86Y34	549 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SIAH3	Q8IW03	269 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SERPINA12	Q8IW75	414 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RIBC1	Q8N443	379 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	UBL4B	Q8N7F7	174 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CNBD1	Q8NA66	436 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PPFIBP2	Q8ND30	876 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ZNF398	Q8TD17	642 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SELENOM	Q8WWX9	145 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RLN3	Q8WXF3	142 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	OR1E3	Q8WZA6	343 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	NPIPB3	Q92617	1050 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RAD54L	Q92698	747 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	RBM41	Q96IZ5	413 aa	Known RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	FAR2	Q96K12	515 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	NECTIN4	Q96NY8	510 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	FCRL4	Q96PJ5	515 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	FYTTD1	Q96QD9	318 aa	Known RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ZNF607	Q96SK3	696 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PIGQ	Q9BRB3	760 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	TIPIN	Q9BVW5	301 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CDT1	Q9H211	546 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	P2RY12	Q9H244	342 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	SLC26A1	Q9H2B4	701 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	GAN	Q9H2C0	597 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CDCP1	Q9H5V8	836 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	TLE6	Q9H808	572 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	METTL7A	Q9H8H3	244 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PCDH9	Q9HC56	1237 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	C6orf50	Q9HD87	102 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	NDUFA13	Q9P0J0	144 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CRNN	Q9UBG3	495 aa	Predicted RBP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CIDEB	Q9UHD4	219 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	LNPEP	Q9UIQ6	1025 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CD207	Q9UJ71	328 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	FZD4	Q9ULV1	537 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	TMCO1	Q9UM00	188 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	VPS4A	Q9UN37	437 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	CDC14A	Q9UNH5	594 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	USH1C	Q9Y6N9	552 aa		4.58	□□□□□ -1.68
RTN4-215	ENST00000491592	ALS2	Q96Q42	1657 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592		A0A1W2PQF6	199 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	TCRBV5S1A1T	A0A578	114 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	TMEM120B	A0PK00	339 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	MYMK	A6NI61	221 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	LINC01548	A6NM66	108 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	BTBD19	C9JJ37	291 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	POLR1C	O15160	346 aa	Predicted RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	PRKAB2	O43741	272 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	DNAJB6	O75190	326 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	TOMM70	O94826	608 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	IL1B	P01584	269 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	FGG	P02679	453 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	CRYGC	P07315	174 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	IGFBP1	P08833	259 aa	Predicted RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	CHRM5	P08912	532 aa	Predicted RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	NHLRC4	P0CG21	123 aa	Predicted RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	RPA2	P15927	270 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	CYP2F1	P24903	491 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	PON1	P27169	355 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	HOXA6	P31267	233 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	STX2	P32856	288 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	SLC16A2	P36021	539 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	SPAM1	P38567	509 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	PCP4	P48539	62 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	DNA2	P51530	1060 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	WDR5	P61964	334 aa	Known RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	IL9R	Q01113	521 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	GALK2	Q01415	458 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	MAB21L1	Q13394	359 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	SSX2	Q16385	188 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	CERKL	Q49MI3	558 aa	Predicted RBP	4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	TMEM119	Q4V9L6	283 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	EPC2	Q52LR7	807 aa		4.57	□□□□□ -1.68
RTN4-215	ENST00000491592	SMUG1	Q53HV7	270 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms