RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ACTN3Q08043 901 aaPredicted RBP29.51■■■□□ 2.31
LDB1-204ENST00000490751 ELOAQ14241 798 aaKnown RBP29.51■■■□□ 2.31
LDB1-204ENST00000490751 WHAMMP3Q1A5X7 153 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 RPUSD3Q6P087 351 aaKnown RBP29.51■■■□□ 2.31
LDB1-204ENST00000490751 KRT78Q8N1N4 520 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 TTLQ8NG68 377 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 MAGEB10Q96LZ2 347 aaPredicted RBP29.51■■■□□ 2.31
LDB1-204ENST00000490751 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP29.51■■■□□ 2.312e-6■■■□□ 16.6
LDB1-204ENST00000490751 CLK4Q9HAZ1 481 aaKnown RBP29.51■■■□□ 2.31
LDB1-204ENST00000490751 TEKT2Q9UIF3 430 aa29.51■■■□□ 2.31
LDB1-204ENST00000490751 HIVEP3Q5T1R4 2406 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 A8MUI8 341 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 STK16O75716 305 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 S100BP04271 92 aaPredicted RBP29.5■■■□□ 2.31
LDB1-204ENST00000490751 STXBP1P61764 594 aaKnown RBP29.5■■■□□ 2.31
LDB1-204ENST00000490751 EXT1Q16394 746 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 SNX31Q8N9S9 440 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 SSC4DQ8WTU2 575 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 CCT6BQ92526 530 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 LPAR4Q99677 370 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 RNF32Q9H0A6 362 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 ALG9Q9H6U8 611 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 COPG2Q9UBF2 871 aa29.5■■■□□ 2.31
LDB1-204ENST00000490751 CLGNO14967 610 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 OR4D2P58180 307 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 DLG1Q12959 904 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 FAM180AQ6UWF9 173 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 TBC1D1Q86TI0 1168 aaPredicted RBP29.49■■■□□ 2.31
LDB1-204ENST00000490751 M1APQ8TC57 530 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 FAR1Q8WVX9 515 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 GAL3ST3Q96A11 431 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 NT5DC2Q9H857 520 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 KCNK13Q9HB14 408 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 STMN3Q9NZ72 180 aa29.49■■■□□ 2.31
LDB1-204ENST00000490751 PTBP2Q9UKA9 531 aaKnown RBP29.49■■■□□ 2.31
LDB1-204ENST00000490751 USP9YO00507 2555 aaPredicted RBP29.48■■■□□ 2.31
LDB1-204ENST00000490751 PRAMEF4O60810 478 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 RNH1P13489 461 aaKnown RBP29.48■■■□□ 2.31
LDB1-204ENST00000490751 TFEBP19484 476 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 GSTM2P28161 218 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 CRABP2P29373 138 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 KCNC1P48547 511 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 PDK4Q16654 411 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 PRAMEF9Q5VWM5 478 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 FCRLBQ6BAA4 426 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 QSOX2Q6ZRP7 698 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 ST6GALNAC3Q8NDV1 305 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 STAG3L4Q8TBR4 150 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 MRRFQ96E11 262 aaKnown RBP29.48■■■□□ 2.31
LDB1-204ENST00000490751 PTCHD1Q96NR3 888 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 PITHD1Q9GZP4 211 aaPredicted RBP29.48■■■□□ 2.31
LDB1-204ENST00000490751 RHBGQ9H310 441 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 EHD1Q9H4M9 534 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 MMP25Q9NPA2 562 aa29.48■■■□□ 2.31
LDB1-204ENST00000490751 OR5H15A6NDH6 313 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 PSMD12O00232 456 aaPredicted RBP29.47■■■□□ 2.31
LDB1-204ENST00000490751 E2F3O00716 465 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 CCNT2O60583 730 aaKnown RBP29.47■■■□□ 2.31
LDB1-204ENST00000490751 RNF224P0DH78 156 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 GP1BBP13224 206 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 HNRNPH1P31943 449 aaKnown RBP29.47■■■□□ 2.31
LDB1-204ENST00000490751 BTN3A2P78410 334 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 XKR6Q5GH73 641 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 H3F3CQ6NXT2 135 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 ISCA2Q86U28 154 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 CA13Q8N1Q1 262 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 ZNF592Q92610 1267 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 SEC16BQ96JE7 1060 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 NMRAL1Q9HBL8 299 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 NUDT4Q9NZJ9 180 aa29.47■■■□□ 2.31
LDB1-204ENST00000490751 A0A0G2JN53 185 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 PRMT3O60678 531 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 CLEC3AO75596 197 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 SLC26A5P58743 744 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 BTG2P78543 158 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 DOC2AQ14183 400 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 MS4A6EQ96DS6 147 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 PTCD3Q96EY7 689 aaKnown RBP29.46■■■□□ 2.31
LDB1-204ENST00000490751 FAR2Q96K12 515 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 ZNF354BQ96LW1 612 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 CD244Q9BZW8 370 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 IGSF5Q9NSI5 407 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 ASB1Q9Y576 335 aa29.46■■■□□ 2.31
LDB1-204ENST00000490751 LRIT2A6NDA9 550 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 ANKDD1BA6NHY2 528 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 FAM227AF5H4B4 570 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 ERI3O43414 337 aaKnown RBP29.45■■■□□ 2.31
LDB1-204ENST00000490751 LTA4HP09960 611 aaKnown RBP29.45■■■□□ 2.31
LDB1-204ENST00000490751 BMPR2Q13873 1038 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 ACER2Q5QJU3 275 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 ADNP2Q6IQ32 1131 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 LRRC70Q7Z2Q7 622 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 VN1R5Q7Z5H4 357 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 BCORP1Q8N888 145 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 WDR34Q96EX3 536 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 ATOH8Q96SQ7 321 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 EFCAB11Q9BUY7 163 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 OLAHQ9NV23 265 aa29.45■■■□□ 2.31
LDB1-204ENST00000490751 SUPT3HB4E1H0 165 aa29.44■■■□□ 2.3
LDB1-204ENST00000490751 KERAO60938 352 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms