RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 MS4A14Q96JA4 679 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 ZNF514Q96K75 400 aaPredicted RBP5.59□□□□□ -1.51
CNOT9-207ENST00000489687 COPS8Q99627 209 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 BCL7BQ9BQE9 202 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 FERMT1Q9BQL6 677 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 CCDC77Q9BR77 488 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 ZPBPQ9BS86 351 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 OR2B2Q9GZK3 357 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 CHST8Q9H2A9 424 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 RUBCNLQ9H714 662 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 KIR3DX1Q9H7L2 352 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 RMND5AQ9H871 391 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 COG4Q9H9E3 785 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 SYTL2Q9HCH5 934 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 LHX9Q9NQ69 397 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 SMARCAL1Q9NZC9 954 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 POMT2Q9UKY4 750 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 RARRES3Q9UL19 164 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.59□□□□□ -1.51
CNOT9-207ENST00000489687 RUVBL2Q9Y230 463 aaKnown RBP5.59□□□□□ -1.51
CNOT9-207ENST00000489687 MAN2B2Q9Y2E5 1009 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 KLHL20Q9Y2M5 609 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 WBP11Q9Y2W2 641 aaKnown RBP5.59□□□□□ -1.51
CNOT9-207ENST00000489687 AP4S1Q9Y587 144 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 KCNMB2Q9Y691 235 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
CNOT9-207ENST00000489687 hCG_2014768A0A024R1R8 64 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 IGLV3-16A0A075B6K0 115 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 K7EPI3 171 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 TOX3O15405 576 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF254O75437 659 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CREG1O75629 220 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 RFPL1O75677 317 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CRTAMO95727 393 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 TTC4O95801 387 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 IFNB1P01574 187 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 RPS17P08708 135 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ENO2P09104 434 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 FAM58BPP0C7Q3 252 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZSCAN5DPP0CG00 497 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 EDN3P14138 238 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ATP1B2P14415 290 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF16P17020 682 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 JAK1P23458 1154 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CFL1P23528 166 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ACRV1P26436 265 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 DCKP27707 260 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 FOXN2P32314 431 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 PGM1P36871 562 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 UQCRFS1P47985 274 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ENTPD1P49961 510 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 AP2S1P53680 142 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 MLLT10P55197 1068 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CRADDP78560 199 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 HSD11B2P80365 405 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 IFITM2Q01629 132 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 KLF1Q13351 362 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 THOC5Q13769 683 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 MPP2Q14168 576 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 SEMA3AQ14563 771 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 IL11RAQ14626 422 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 DUSP7Q16829 419 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 KLHL38Q2WGJ6 581 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF658BQ4V348 819 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 SYTL3Q4VX76 610 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF789Q5FWF6 425 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 C1orf189Q5VU69 101 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 KCTD11Q693B1 232 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 NANOGP8Q6NSW7 305 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF449Q6P9G9 518 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 FAM198BQ6UWH4 519 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CDHR3Q6ZTQ4 885 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 RFPL4BQ6ZWI9 263 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 USP43Q70EL4 1123 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 SNX20Q7Z614 316 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 LDB1Q86U70 411 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 C2orf73Q8N5S3 287 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 OR10Z1Q8NGY1 313 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 GRPEL2Q8TAA5 225 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 SLC35B2Q8TB61 432 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 RAB3IL1Q8TBN0 382 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 APOBEC4Q8WW27 367 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 C1orf54Q8WWF1 131 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 STON2Q8WXE9 905 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ULK4Q96C45 1275 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF501Q96CX3 271 aaPredicted RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 MAELQ96JY0 434 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF778Q96MU6 729 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 FERD3LQ96RJ6 166 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ZNF347Q96SE7 839 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 CIB1Q99828 191 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 C1orf50Q9BV19 199 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 HOXD1Q9GZZ0 328 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 OR52A5Q9H2C5 316 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 ADNPQ9H2P0 1102 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 TRIT1Q9H3H1 467 aaKnown RBP5.58□□□□□ -1.52
CNOT9-207ENST00000489687 SRMSQ9H3Y6 488 aa5.58□□□□□ -1.52
CNOT9-207ENST00000489687 LRRC40Q9H9A6 602 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms