RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FPGTO14772 594 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 KMOO15229 486 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 KDM1AO60341 852 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ICMTO60725 284 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SCN2BO60939 215 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ADAM23O75077 832 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 POP7O75817 140 aaKnown RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ALPLP05186 524 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ANXA4P09525 319 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 COX7A2P14406 83 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NCK1P16333 377 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NPPBP16860 134 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PAX7P23759 505 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PTX3P26022 381 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 P2RY2P41231 377 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 MAGEA8P43361 318 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NEK2P51955 445 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ARHGDIAP52565 204 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ESRRGP62508 458 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PHC1P78364 1004 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ADARB1P78563 741 aaKnown RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ROR2Q01974 943 aaKnown RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TAP2Q03519 686 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 RBBP4Q09028 425 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PDE7AQ13946 482 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SELPLGQ14242 412 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 UGT8Q16880 541 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 VMACQ2NL98 169 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PGS1Q32NB8 556 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CYBRD1Q53TN4 286 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PIP5KL1Q5T9C9 394 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CPTPQ5TA50 214 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PNCKQ6P2M8 343 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TTC33Q6PID6 262 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SLC30A9Q6PML9 568 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 GCNT7Q6ZNI0 430 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SYT13Q7L8C5 426 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 LRRTM4Q86VH4 590 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 AMZ2Q86W34 360 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 LRRC56Q8IYG6 542 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 CFAP206Q8IYR0 622 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 FAM47BQ8NA70 645 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 OR5K1Q8NHB7 308 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 HUS1BQ8NHY5 278 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NAT14Q8WUY8 206 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SLC5A11Q8WWX8 675 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ASB12Q8WXK4 309 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 FIG4Q92562 907 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ATOH1Q92858 354 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NEIL2Q969S2 332 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SLC47A1Q96FL8 570 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 MED8Q96G25 268 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PYURFQ96I23 114 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 QRFPRQ96P65 431 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 GABRG3Q99928 467 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TUBA1CQ9BQE3 449 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 DUSP26Q9BV47 211 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 TEX101Q9BY14 249 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 YIPF3Q9GZM5 350 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 REXO4Q9GZR2 422 aaKnown RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 OR2AG1Q9H205 316 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 OR52A5Q9H2C5 316 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 MYNNQ9NPC7 610 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PRSS16Q9NQE7 514 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PAPOLBQ9NRJ5 636 aaKnown RBP8.12□□□□□ -1.11
VTI1A-207ENST00000489357 AASDHPPTQ9NRN7 309 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ATXN10Q9UBB4 475 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 SCML1Q9UN30 329 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 VPS4AQ9UN37 437 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 ITM2BQ9Y287 266 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 NUMA1Q14980 2115 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 GPR179Q6PRD1 2367 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 LRRK1Q38SD2 2015 aa8.12□□□□□ -1.11
VTI1A-207ENST00000489357 PIPSLA2A3N6 862 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 UPK1AO00322 258 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TPST1O60507 370 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 MMP20O60882 483 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 DNAJB5O75953 348 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 CST1P01037 141 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 EPHX1P07099 455 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 THRBP10828 461 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 BMP4P12644 408 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TACR1P25103 407 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 GSTT1P30711 240 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TRIM23P36406 574 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 CXCL12P48061 93 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 PREPP48147 710 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 ALDH3B2P48448 385 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 RAD23AP54725 363 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 WNT3P56703 355 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 YBX1P67809 324 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 FADDQ13158 208 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 DYNC1I2Q13409 638 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 TOP3AQ13472 1001 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 CST6Q15828 149 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 CNPY1Q3B7I2 92 aa8.11□□□□□ -1.11
VTI1A-207ENST00000489357 RBM48Q5RL73 367 aaKnown RBP8.11□□□□□ -1.11
VTI1A-207ENST00000489357 PRAMEF14Q5SWL7 426 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms