RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 MT-ND2P03891 347 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SPP1P10451 314 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SCG2P13521 617 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 GP9P14770 177 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 GLULP15104 373 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 PTAFRP25105 342 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 PSMA3P25788 255 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SSTR1P30872 391 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 CTNNA1P35221 906 aaKnown RBP2.85□□□□□ -1.95
RFC4-213ENST00000489028 CDX1P47902 265 aaPredicted RBP2.85□□□□□ -1.95
RFC4-213ENST00000489028 NPY4RP50391 375 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 IL10RBQ08334 325 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SIX1Q15475 284 aaPredicted RBP2.85□□□□□ -1.95
RFC4-213ENST00000489028 UGCGQ16739 394 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 ZNF542PQ5EBM4 170 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 C1QTNF12Q5T7M4 302 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 REG3GQ6UW15 175 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 ERN2Q76MJ5 926 aaKnown RBP2.85□□□□□ -1.95
RFC4-213ENST00000489028 COX8CQ7Z4L0 72 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 SLFN11Q7Z7L1 901 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 KCNMB4Q86W47 210 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 CARM1Q86X55 608 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 PRSS35Q8N3Z0 413 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 TEX26Q8N6G2 289 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 RTL3Q8N8U3 475 aaKnown RBP2.85□□□□□ -1.95
RFC4-213ENST00000489028 IQUBQ8NA54 791 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 OR5M9Q8NGP3 310 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 KIF18AQ8NI77 898 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 TYMSOSQ8TAI1 123 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 ZPLD1Q8TCW7 415 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 HEXDCQ8WVB3 486 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 IL12RB2Q99665 862 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 KLK11Q9UBX7 282 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 TSPAN16Q9UKR8 245 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 AGTPBP1Q9UPW5 1226 aa2.85□□□□□ -1.95
RFC4-213ENST00000489028 IGLV3-10A0A075B6K4 115 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 A0A087WV48 116 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 IGKV6D-41A0A0C4DH26 115 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ZNF840PA6NDX5 716 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 NKX6-3A6NJ46 265 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ANXA2P2A6NMY6 339 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 A8MU76 341 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 TMEM150CB9EJG8 249 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ZNF354AO60765 605 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 FCGR3BO75015 233 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 MTRF1O75570 445 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 DNAH10OSP0CZ25 163 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 DLATP10515 647 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 EEF2P13639 858 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 ADRA2CP18825 462 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 PKLRP30613 574 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 GSK3BP49841 420 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ERVK-16P61578 105 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 KRT83P78385 493 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ITPK1Q13572 414 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 MLF2Q15773 248 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 CCDC184Q52MB2 194 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ZNF770Q6IQ21 691 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 C11orf57Q6ZUT1 292 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 CCDC186Q7Z3E2 898 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 TRMT11Q7Z4G4 463 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 GALNTL5Q7Z4T8 443 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 GPR141Q7Z602 305 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 DNAJB7Q7Z6W7 309 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 MARCH9Q86YJ5 346 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ZNF584Q8IVC4 421 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 CROCCP3Q8IVE0 287 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 GPATCH11Q8N954 259 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 SUMF1Q8NBK3 374 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 CD99L2Q8TCZ2 262 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 LMAN1LQ9HAT1 526 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 PFDN4Q9NQP4 134 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 ARGLU1Q9NWB6 273 aaPredicted RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 SLC12A6Q9UHW9 1150 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 SNX7Q9UNH6 387 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 SATB2Q9UPW6 733 aa2.84□□□□□ -1.95
RFC4-213ENST00000489028 RUVBL2Q9Y230 463 aaKnown RBP2.84□□□□□ -1.95
RFC4-213ENST00000489028 TRAV18A0A075B6X5 111 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 LMO7DNF2Z398 122 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 FLRT2O43155 660 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 PPIP5K2O43314 1243 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 TNFSF12O43508 249 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 GPRIN2O60269 458 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 HPP00738 406 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 GIFP27352 417 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 ZNF41P51814 821 aaPredicted RBP2.83□□□□□ -1.96
RFC4-213ENST00000489028 KRTAP12-2P59991 146 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 TFCP2Q12800 502 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 SCARB2Q14108 478 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 RNF212Q495C1 297 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 LRRC37A5PQ49AS3 106 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 FAM182AQ5T1J6 154 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 FAM46CQ5VWP2 391 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 TXNRD3NBQ6F5E7 133 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 Q6ZVQ6 151 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 ADCK2Q7Z695 626 aa2.83□□□□□ -1.96
RFC4-213ENST00000489028 C11orf53Q8IXP5 236 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms