RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ADGRE2Q9UHX3 823 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 PCDHGA11Q9Y5H2 935 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 KCNMB2Q9Y691 235 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 BOD1L1Q8NFC6 3051 aa17.65■□□□□ 0.42
PTCD3-217ENST00000488801 PPP6CO00743 305 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 FFAR3O14843 346 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 GPR42O15529 346 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 SCELO95171 688 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 BMP10O95393 424 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 B3GALT4O96024 378 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 SERPIND1P05546 499 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 CYC1P08574 325 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 MYL2P10916 166 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 CREB1P16220 341 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 MMP11P24347 488 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 DNAJB13P59910 316 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 CLCQ05315 142 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 PCLAFQ15004 111 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 DEFB134Q4QY38 66 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 VWA2Q5GFL6 755 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 LETMD1Q6P1Q0 360 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 RAB43Q86YS6 212 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 APLFQ8IW19 511 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-217ENST00000488801 OR5T3Q8NGG3 340 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 HUS1BQ8NHY5 278 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 PGM2Q96G03 612 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 WBP1Q96G27 269 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 CDK15Q96Q40 435 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 ZNF382Q96SR6 550 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 OXSMQ9NWU1 459 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 PSD3Q9NYI0 1048 aa17.64■□□□□ 0.41
PTCD3-217ENST00000488801 CFAP46Q8IYW2 2715 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 SOCS6O14544 535 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 OTCP00480 354 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 HPDP32754 393 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 CDH13P55290 713 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 RAB8AP61006 207 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 SKP1P63208 163 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 OCA2Q04671 838 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 CEP85LQ5SZL2 805 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 C10orf62Q5T681 223 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 ABHD17CQ6PCB6 329 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 BORAQ6PGQ7 559 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 UBE3DQ7Z6J8 389 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 CROCCP2Q86T23 111 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 MYRIPQ8NFW9 859 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 OR4F6Q8NGB9 312 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 OR51Q1Q8NH59 317 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 EXTL1Q92935 676 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 MIEF2Q96C03 454 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 REPS1Q96D71 796 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 IP6K3Q96PC2 410 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 OR1F2PQ96R84 312 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 UBL7Q96S82 380 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 REXO4Q9GZR2 422 aaKnown RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 SOX17Q9H6I2 414 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 SSU72Q9NP77 194 aaKnown RBP17.63■□□□□ 0.41
PTCD3-217ENST00000488801 SEMA3GQ9NS98 782 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 HCN3Q9P1Z3 774 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 TRPS1Q9UHF7 1281 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 MID2Q9UJV3 735 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 HS3ST3B1Q9Y662 390 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 KALRNO60229 2985 aa17.63■□□□□ 0.41
PTCD3-217ENST00000488801 ZNF860A6NHJ4 632 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 RGS16O15492 202 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ERI3O43414 337 aaKnown RBP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 DNAJB6O75190 326 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 SUPT7LO94864 414 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 IL10P22301 178 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ETV4P43268 484 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 XCR1P46094 333 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ARFIP1P53367 373 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 NAA20P61599 178 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ATP1A4Q13733 1029 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ZRSR2Q15696 482 aaKnown RBP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 CPSF6Q16630 551 aaKnown RBP eCLIP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 DEFB109BQ30KR1 87 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 FRMD7Q6ZUT3 714 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 LAPTM4BQ86VI4 370 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 RNF175Q8N4F7 328 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 CCT6BQ92526 530 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 MAGEB10Q96LZ2 347 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ZNF717Q9BY31 904 aaPredicted RBP17.62■□□□□ 0.41
PTCD3-217ENST00000488801 PRDM7Q9NQW5 492 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ACSS2Q9NR19 701 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 LANCL2Q9NS86 450 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 SLC17A7Q9P2U7 560 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 MAN2B2Q9Y2E5 1009 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 ACTL7BQ9Y614 415 aa17.62■□□□□ 0.41
PTCD3-217ENST00000488801 MAGEB17A8MXT2 336 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 IDSB3KWA1 339 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 FOXE1O00358 373 aaPredicted RBP17.61■□□□□ 0.41
PTCD3-217ENST00000488801 ATXN7O15265 892 aaPredicted RBP17.61■□□□□ 0.41
PTCD3-217ENST00000488801 JRKO75564 520 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 IGHEP01854 428 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 PCNAP12004 261 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 CPA3P15088 417 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 H2AFXP16104 143 aaPredicted RBP17.61■□□□□ 0.41
PTCD3-217ENST00000488801 TSPAN8P19075 237 aa17.61■□□□□ 0.41
PTCD3-217ENST00000488801 LCP2Q13094 533 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms