RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ASPHD2Q6ICH7 369 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 UGT3A1Q6NUS8 523 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TTC27Q6P3X3 843 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GPR141Q7Z602 305 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GCNT2Q8N0V5 402 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 NEXN-AS1Q8NBZ9 246 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 OR14A16Q8NHC5 309 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 THAP6Q8TBB0 222 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 IRGQQ8WZA9 623 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 OXNAD1Q96HP4 312 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 PIWIL1Q96J94 861 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 CXorf58Q96LI9 332 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 ZNF48Q96MX3 618 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 RAB40CQ96S21 281 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ALKBH7Q9BT30 221 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 ALG12Q9BV10 488 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PRSS22Q9GZN4 317 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ARRDC1-AS1Q9H2J1 176 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 C5orf66Q9H5L9 145 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 RPRD1BQ9NQG5 326 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 PDGFCQ9NRA1 345 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 DDX28Q9NUL7 540 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 VPS54Q9P1Q0 977 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 FOXJ3Q9UPW0 622 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SRPRBQ9Y5M8 271 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 PTPRCP08575 1304 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CLSPNQ9HAW4 1339 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SERTM2A0A1B0GWG4 89 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CCDC162PA2VCL2 907 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 OR5K3A6NET4 321 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 H0Y8G0 127 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 M0R296 226 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PDXKO00764 312 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SDHDO14521 159 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GAPDHSO14556 408 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 DVL1O14640 695 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 DNALI1O14645 258 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 PRRG1O14668 218 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 MDM4O15151 490 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 OGTO15294 1046 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SCO2O43819 266 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 BCAR3O75815 825 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CIB2O75838 187 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 YES1P07947 543 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CYP11B1P15538 503 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PTGFRP43088 359 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 MAGEA11P43364 429 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 OR1G1P47890 313 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 RFX5P48382 616 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 RGS4P49798 205 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PEX5P50542 639 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 KCNK10P57789 538 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PDE1BQ01064 536 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SP3Q02447 781 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TRAF1Q13077 416 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 BTG3Q14201 252 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 EFTUD2Q15029 972 aaKnown RBP eCLIP3.3□□□□□ -1.882e-7■■■□□ 17.5
HFM1-208ENST00000488023 DAZAP2Q15038 168 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 RCN1Q15293 331 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TRIP10Q15642 601 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ETFDHQ16134 617 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 AMZ1Q400G9 498 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 IL23RQ5VWK5 629 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 FUT10Q6P4F1 479 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PACS1Q6VY07 963 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CTU1Q7Z7A3 348 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 PTOV1Q86YD1 416 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PHC2Q8IXK0 858 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 KLHDC1Q8N7A1 406 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 WFIKKN2Q8TEU8 576 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CHPT1Q8WUD6 406 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CCDC107Q8WV48 283 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PHYHIPQ92561 330 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GLYATL1Q969I3 302 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 NT5C3BQ969T7 300 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TSACCQ96A04 125 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 RBM41Q96IZ5 413 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 TPD52L3Q96J77 140 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GUCD1Q96NT3 240 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 BTBD9Q96Q07 612 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GSDMAQ96QA5 445 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TRAF4Q9BUZ4 470 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 ACTL8Q9H568 366 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PSME2Q9UL46 239 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 NIP7Q9Y221 180 aaKnown RBP eCLIP3.3□□□□□ -1.882e-9■■■■■ 36.3
HFM1-208ENST00000488023 MRPS33Q9Y291 106 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 AP4B1Q9Y6B7 739 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 DDX49Q9Y6V7 483 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 WDR17Q8IZU2 1322 aa3.29□□□□□ -1.88
HFM1-208ENST00000488023 GOLGA6L7A0A1B0GV03 622 aa3.29□□□□□ -1.88
HFM1-208ENST00000488023 MED19A0JLT2 244 aaPredicted RBP3.29□□□□□ -1.88
HFM1-208ENST00000488023 C5orf60A6NFR6 353 aa3.29□□□□□ -1.88
HFM1-208ENST00000488023 A8MUI8 341 aa3.29□□□□□ -1.88
HFM1-208ENST00000488023 ANKRD66B4E2M5 251 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms