RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DISP3Q9P2K9 1392 aa3.25□□□□□ -1.89
HMGB1P36-201ENST00000487709 IGKV3D-15A0A087WSY6 115 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 A0A087WZ39 114 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 A0A0U1RQG5 324 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 H3BMM5 538 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 M0R296 226 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 CCL24O00175 119 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 CACNB4O00305 520 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 TFECO14948 347 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 TTI1O43156 1089 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 SBK2P0C263 348 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 CD59P13987 128 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 AZU1P20160 251 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 GPR183P32249 361 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 KCNJ1P48048 391 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 TMEM50BP56557 158 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 ABCE1P61221 599 aaKnown RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 IRX4P78413 519 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 LCP2Q13094 533 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 FASTKD3Q14CZ7 662 aaKnown RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 RPS6KA1Q15418 735 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 DUSP5Q16690 384 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 CES4AQ5XG92 561 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 PM20D1Q6GTS8 502 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 OR4C11Q6IEV9 310 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 ALKBH5Q6P6C2 394 aaKnown RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 DHRS11Q6UWP2 260 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 RFPL4BQ6ZWI9 263 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 STXBP4Q6ZWJ1 553 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 COX8CQ7Z4L0 72 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 SMYD1Q8NB12 490 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 SPC24Q8NBT2 197 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 SNRNP40Q96DI7 357 aaKnown RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 NXPE2Q96DL1 559 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 EEF2KMTQ96G04 330 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 LURAP1Q96LR2 239 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 LINC00479Q96M42 142 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 FGFBP2Q9BYJ0 223 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 ZNF350Q9GZX5 532 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 UPF3AQ9H1J1 476 aaKnown RBP3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 NDE1Q9NXR1 346 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 TEKT2Q9UIF3 430 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 FBXW2Q9UKT8 454 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 STX8Q9UNK0 236 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 PLCL2Q9UPR0 1127 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 WIPI2Q9Y4P8 454 aa3.24□□□□□ -1.89
HMGB1P36-201ENST00000487709 A0A1W2PR80 420 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 CCDC162PA2VCL2 907 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 SAP30O75446 220 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 MT-ND2P03891 347 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 RPLP0P05388 317 aaKnown RBP3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 UROSP10746 265 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 ATP6V1B1P15313 513 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 C4BPBP20851 252 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 PKLRP30613 574 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 OPRL1P41146 370 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 SOX3P41225 446 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 NOVP48745 357 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 ERVK-16P61578 105 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 IRX6P78412 446 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 DHODHQ02127 395 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 DRP2Q13474 957 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 FRRS1Q6ZNA5 592 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 KCTD9Q7L273 389 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 KRTAP7-1Q8IUC3 87 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 METTL4Q8N3J2 472 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 TEX26Q8N6G2 289 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 AMER3Q8N944 861 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 LPCAT1Q8NF37 534 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 OR13C5Q8NGS8 318 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 RPLP0P6Q8NHW5 317 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 SEPT8Q92599 483 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 RFT1Q96AA3 541 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 C2orf48Q96LS8 159 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 LGMNQ99538 433 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 SP140LQ9H930 580 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 GPN1Q9HCN4 374 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 RAB9BQ9NP90 201 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 SPG21Q9NZD8 308 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 PYGO1Q9Y3Y4 419 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 HBS1LQ9Y450 684 aaKnown RBP3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 ANGPTL3Q9Y5C1 460 aa3.23□□□□□ -1.89
HMGB1P36-201ENST00000487709 TP53BP1Q12888 1972 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 LOC105371242A0A075B767 164 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 TMCO5BA8MYB1 307 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 CLDN1O95832 211 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 PDHA2P29803 388 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 KHKP50053 298 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 KCNK10P57789 538 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 IRX1P78414 480 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 UBXN1Q04323 297 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 CNTN1Q12860 1018 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 LRRC37A5PQ49AS3 106 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 RFTN2Q52LD8 501 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 FASTKD1Q53R41 847 aaKnown RBP3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 C1QTNF12Q5T7M4 302 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 AGAP6Q5VW22 663 aa3.22□□□□□ -1.89
HMGB1P36-201ENST00000487709 METTL7BQ6UX53 244 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms