RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TRILQ7L0X0 811 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 VN1R4Q7Z5H5 301 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 LDB1Q86U70 411 aaPredicted RBP7.12□□□□□ -1.27
PDPN-205ENST00000487038 PDSS2Q86YH6 399 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 FBXW8Q8N3Y1 598 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 B3GNT7Q8NFL0 401 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 ZNF480Q8WV37 535 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SLC13A3Q8WWT9 602 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 ASB15Q8WXK1 588 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SLCO2A1Q92959 643 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 VMP1Q96GC9 406 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 Q96MF0 132 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 PRAP1Q96NZ9 151 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 GBP4Q96PP9 640 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 FAM118BQ9BPY3 351 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 FAM173AQ9BQD7 235 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 PLEKHF2Q9H8W4 249 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 CCDC177Q9NQR7 707 aaPredicted RBP7.12□□□□□ -1.27
PDPN-205ENST00000487038 SPTLC3Q9NUV7 552 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 ALKBH4Q9NXW9 302 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SLC2A6Q9UGQ3 507 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 TCAF1Q9Y4C2 921 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 PCDHGB3Q9Y5G1 929 aa7.12□□□□□ -1.27
PDPN-205ENST00000487038 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.12□□□□□ -1.27
PDPN-205ENST00000487038 TCRBV16S1A1N1A0A5B0 115 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 SYNDIG1LA6NDD5 238 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 RNF212BA8MTL3 300 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 E7ENX8 843 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 NDUFS4O43181 175 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 HCN1O60741 890 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 B4GALT2O60909 372 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 AVILO75366 819 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 ESR1P03372 595 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 CHRM3P20309 590 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 CTNNA1P35221 906 aaKnown RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 MAGEA5P43359 124 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 TBPL1P62380 186 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 TAP2Q03519 686 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 GBX1Q14549 363 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PHKG1Q16816 387 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 KLHL38Q2WGJ6 581 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 CAPN13Q6MZZ7 669 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 PRSS57Q6UWY2 283 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 C16orf47Q6ZP98 133 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 ABHD13Q7L211 337 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 MAATS1Q7Z4T9 603 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 SDCCAG8Q86SQ7 713 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 SLC26A11Q86WA9 606 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 TBC1D19Q8N5T2 526 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 FAM71DQ8N9W8 422 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 RELL2Q8NC24 303 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 KCT2Q8NC54 265 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 APCDD1LQ8NCL9 501 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 FBXO15Q8NCQ5 510 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 OR5T3Q8NGG3 340 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 OR8K1Q8NGG5 319 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 ZNF592Q92610 1267 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 KRT35Q92764 455 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PIGTQ969N2 578 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 TM4SF19Q96DZ7 209 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PKP4Q99569 1192 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 DNAJC7Q99615 494 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PIP5K1AQ99755 562 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PCBD2Q9H0N5 130 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 GOLPH3Q9H4A6 298 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 NHEJ1Q9H9Q4 299 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 IL1RL2Q9HB29 575 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 PRDM9Q9NQV7 894 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 DEPPQ9NTK1 212 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 ZNF629Q9UEG4 869 aaPredicted RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 DRG1Q9Y295 367 aaKnown RBP7.11□□□□□ -1.27
PDPN-205ENST00000487038 GTF3C3Q9Y5Q9 886 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 LIPGQ9Y5X9 500 aa7.11□□□□□ -1.27
PDPN-205ENST00000487038 TRGV5A0A0B4J1U4 118 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ATP6AP2A0A1C7CYW4 349 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 PINLYPA6NC86 204 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 URADA6NGE7 173 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 GOLGA6L19H0YKK7 550 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 SLC16A5O15375 505 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ZBTB14O43829 449 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 GALR3O60755 368 aaPredicted RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 NIPSNAP2O75323 286 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ATP6AP2O75787 350 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ZFAND5O76080 213 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 MYO1DO94832 1006 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 GLSO94925 669 aaPredicted RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 IFNA2P01563 188 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 IL2RAP01589 272 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 ALOX12P18054 663 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 CNR1P21554 472 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 CCND1P24385 295 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 RWDD2BP57060 319 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 SNRPNP63162 240 aaKnown RBP7.1□□□□□ -1.27
PDPN-205ENST00000487038 RGS1Q08116 209 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 SLC10A1Q14973 349 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 SF3B4Q15427 424 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDPN-205ENST00000487038 TYSND1Q2T9J0 566 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 BBS9Q3SYG4 887 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 CTSL3PQ5NE16 218 aa7.1□□□□□ -1.27
PDPN-205ENST00000487038 HECTD2Q5U5R9 776 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms