RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GGT5P36269 586 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 GMPRP36959 345 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 UQCRFS1P47985 274 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 GLRBP48167 497 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 IRF9Q00978 393 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ACTN3Q08043 901 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-208ENST00000486404 TGM3Q08188 693 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 LAPTM5Q13571 262 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF169Q14929 603 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-208ENST00000486404 TLR1Q15399 786 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 NSDHLQ15738 373 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 HIST2H2ACQ16777 129 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ABHD17BQ5VST6 288 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 HIST2H2AA3Q6FI13 130 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 TRIM40Q6P9F5 258 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 Q6ZS92 163 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 KCTD4Q8WVF5 259 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ESAMQ96AP7 390 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 LPAR4Q99677 370 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 RHBGQ9H310 441 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 IGSF5Q9NSI5 407 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 OPTCQ9UBM4 332 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ANGPTL3Q9Y5C1 460 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 A0A096LPK6 155 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 MAGEB17A8MXT2 336 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ITGAMP11215 1152 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 TYK2P29597 1187 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 SOX11P35716 441 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 EFNA3P52797 238 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 OR4D2P58180 307 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 RHAGQ02094 409 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 IRF8Q02556 426 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ZNF33BQ06732 778 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 DLG1Q12959 904 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 DOC2AQ14183 400 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 EXT1Q16394 746 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 SFT2D3Q587I9 215 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 B3GNTL1Q67FW5 361 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 PAPD4Q6PIY7 484 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 IGFL2Q6UWQ7 119 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CUZD1Q86UP6 607 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 MYLK4Q86YV6 388 aaPredicted RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ARMC2Q8NEN0 867 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 UBTD2Q8WUN7 234 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 TSLPQ969D9 159 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 NXNL1Q96CM4 212 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 LMF1Q96S06 567 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 PAFAH2Q99487 392 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CD244Q9BZW8 370 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 VPS11Q9H270 941 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CLK4Q9HAZ1 481 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 AGPAT4Q9NRZ5 378 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 LANCL2Q9NS86 450 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 PTBP2Q9UKA9 531 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 CSAG2Q9Y5P2 127 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 COPG1Q9Y678 874 aaKnown RBP12.14□□□□□ -0.47
CHMP3-208ENST00000486404 DOPEY2Q9Y3R5 2298 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
CHMP3-208ENST00000486404 LRRK2Q5S007 2527 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 FLNBO75369 2602 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 A0A087WUV0 522 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 A0A0G2JN53 185 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 OR2W5A6NFC9 320 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 K7EPI3 171 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 B3GALT2O43825 422 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 PRMT3O60678 531 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CLEC3AO75596 197 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 KRT38O76015 456 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 C2P06681 752 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 PCNAP12004 261 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 HNRNPH1P31943 449 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 MSH2P43246 934 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 TSFMP43897 325 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 SERPINB9P50453 376 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 TAS2R50P59544 299 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 BTN3A2P78410 334 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 HYAL2Q12891 473 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CHIT1Q13231 466 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 PLAG1Q6DJT9 500 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 QSOX2Q6ZRP7 698 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CENPLQ8N0S6 344 aaPredicted RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 FAM26EQ8N5C1 309 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 RHEBL1Q8TAI7 183 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 SUN3Q8TAQ9 357 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 ADAMTS18Q8TE60 1221 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms