RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 MTHFD2P13995 350 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 IL1RNP18510 177 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 PHBP35232 272 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 GDF5P43026 501 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 XCR1P46094 333 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 EFNA3P52797 238 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ARFIP1P53367 373 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 STXBP1P61764 594 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 SLC7A5Q01650 507 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 RHAGQ02094 409 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SRSF1Q07955 248 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS50-218ENST00000485994 ACAP2Q15057 778 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 TLR1Q15399 786 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 EXT1Q16394 746 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SYT16Q17RD7 645 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 TMIGD1Q6UXZ0 262 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 QSOX2Q6ZRP7 698 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 PRSS41Q7RTY9 318 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ANKRD37Q7Z713 158 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CTAGE6Q86UF2 777 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CTAGE4Q8IX94 777 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CTAGE3PQ8IX95 158 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ARMC10Q8N2F6 343 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 FAM26EQ8N5C1 309 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 METTL27Q8N6F8 245 aaPredicted RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 PPM1NQ8N819 430 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SRFBP1Q8NEF9 429 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 KIF18AQ8NI77 898 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ISL2Q96A47 359 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ALKBH8Q96BT7 664 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 TBC1D20Q96BZ9 403 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 C8orf44Q96CB5 159 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SNRNP40Q96DI7 357 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 MOCOSQ96EN8 888 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 PTCD3Q96EY7 689 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 C16orf45Q96MC5 204 aaPredicted RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 MACROD1Q9BQ69 325 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 TMEM79Q9BSE2 394 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 EFCAB11Q9BUY7 163 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 YIPF2Q9BWQ6 316 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SLC29A3Q9BZD2 475 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CD244Q9BZW8 370 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 SPNS1Q9H2V7 528 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ACSS3Q9H6R3 686 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 CAB39LQ9H9S4 337 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ZBTB20Q9HC78 741 aaPredicted RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 ZNF160Q9HCG1 818 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 LANCL2Q9NS86 450 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 DNAJC11Q9NVH1 559 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ADGRE2Q9UHX3 823 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 ZNF490Q9ULM2 529 aaPredicted RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 PLAAQ9Y263 795 aa6.6□□□□□ -1.35
VPS50-218ENST00000485994 COPG1Q9Y678 874 aaKnown RBP6.6□□□□□ -1.35
VPS50-218ENST00000485994 A0A088AWK7 358 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 DYTNA2CJ06 578 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 LRIT2A6NDA9 550 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 WIPF3A6NGB9 483 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ANKDD1BA6NHY2 528 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 SYCE1LA8MT33 242 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MASP2O00187 686 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PHGDHO43175 533 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 PRAMEF4O60810 478 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 KERAO60938 352 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 JRKO75564 520 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 FAM155BO75949 473 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 WDR47O94967 919 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 KLHL2O95198 593 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 TBX6O95947 436 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 C2P06681 752 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 FHP07954 510 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ZNF888P0CJ79 500 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 COL6A2P12110 1019 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 RNH1P13489 461 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 TFEBP19484 476 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ZNF10P21506 573 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 JAK1P23458 1154 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 CNTFP26441 200 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 SERPINB1P30740 379 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MAGEA12P43365 314 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 SERPINB9P50453 376 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 TNFSF10P50591 281 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 MAT1AQ00266 395 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 DLG1Q12959 904 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 BIKQ13323 160 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 DOC2AQ14183 400 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 ZNF169Q14929 603 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 SLMAPQ14BN4 828 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 RBBP5Q15291 538 aaKnown RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 PCBP2Q15366 365 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS50-218ENST00000485994 TERF2Q15554 542 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 OR4D1Q15615 310 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 NSDHLQ15738 373 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 INAQ16352 499 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 HIST2H2ACQ16777 129 aaPredicted RBP6.59□□□□□ -1.35
VPS50-218ENST00000485994 FAM83EQ2M2I3 478 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 DEFB134Q4QY38 66 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PAGE2BQ5JRK9 111 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 COLEC12Q5KU26 742 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 PRAMEF9Q5VWM5 478 aa6.59□□□□□ -1.35
VPS50-218ENST00000485994 LIPJQ5W064 366 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms