RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ZNF223Q9UK11 482 aaPredicted RBP10.12□□□□□ -0.79
SMARCC1-205ENST00000483847 EDARQ9UNE0 448 aa10.12□□□□□ -0.79
SMARCC1-205ENST00000483847 IGKV3D-11A0A0A0MRZ8 115 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 TCRBV16S1A1N1A0A5B0 115 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 GOLGA6L9A6NEM1 432 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 FIGNL2A6NMB9 653 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 BCKDKO14874 412 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 PRKNO60260 465 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 VAPBO95292 243 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 ESR1P03372 595 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 PTMAP06454 111 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 CELA3AP09093 270 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 PCSK6P29122 969 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 SKIV2L2P42285 1042 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 CLCN7P51798 805 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 SESN2P58004 480 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 KEAP1Q14145 624 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 RPS6KA1Q15418 735 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 CXXC5Q7LFL8 322 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 PRELID2Q8N945 189 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 RELL2Q8NC24 303 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 SPATA3Q8NHX4 192 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 CREB3L4Q8TEY5 395 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 SREK1Q8WXA9 508 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 ASB11Q8WXH4 323 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 THAP11Q96EK4 314 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 TTTY12Q9BZ98 90 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 LIN28AQ9H9Z2 209 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 CCDC177Q9NQR7 707 aaPredicted RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 TRMT1Q9NXH9 659 aaKnown RBP10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 FBXW2Q9UKT8 454 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 EML6Q6ZMW3 1958 aa10.11□□□□□ -0.79
SMARCC1-205ENST00000483847 OR14I1A6ND48 311 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 H3BMM5 538 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 GFYI3L273 518 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ACOT7O00154 380 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 SYT5O00445 386 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 NDUFS4O43181 175 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 GLSO94925 669 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 OR6B1O95007 311 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 IFNB1P01574 187 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 IGHG3P01860 377 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 APRTP07741 180 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 TPM1P09493 284 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 SLC35G6P0C7Q6 338 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 CDH1P12830 882 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ALOX12P18054 663 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 JAK1P23458 1154 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 HRH2P25021 359 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 FDFT1P37268 417 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MAGEA5P43359 124 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 SSR4P51571 173 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MEF2AQ02078 507 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 HERC3Q15034 1050 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 XKR6Q5GH73 641 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 C1orf185Q5T7R7 199 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 CYHR1Q6ZMK1 362 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 QSOX2Q6ZRP7 698 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 KIAA0408Q6ZU52 694 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 TRILQ7L0X0 811 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 CIARTQ8N365 385 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 TMEM251Q8N6I4 163 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 LRRC57Q8N9N7 239 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MFSD9Q8NBP5 474 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 LRRN4CLQ8ND94 238 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 B3GNT7Q8NFL0 401 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 FAM222BQ8WU58 562 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MFSD3Q96ES6 412 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ZNF395Q9H8N7 513 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 PLEKHF2Q9H8W4 249 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ALKBH4Q9NXW9 302 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 PACSIN2Q9UNF0 486 aaPredicted RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ERVK-11Q9UQG0 969 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 DRG1Q9Y295 367 aaKnown RBP10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MED16Q9Y2X0 877 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 ARHGAP21Q5T5U3 1957 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 MPDZO75970 2070 aa10.1□□□□□ -0.79
SMARCC1-205ENST00000483847 A0A1B0GVC2 190 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 CTAGE15A4D2H0 777 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 GRID2IPA4D2P6 1211 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 E5RI56 91 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 AQP7O14520 342 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 CEP104O60308 925 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 WDR1O75083 606 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 OR2J2O76002 312 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 MYO1DO94832 1006 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ZNF888P0CJ79 500 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 TACR1P25103 407 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 PPP2R1BP30154 601 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 CLCN2P51788 898 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 ADARP55265 1226 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 NKX6-1P78426 367 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 DAZAP2Q15038 168 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 OASLQ15646 514 aaKnown RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 MRNIPQ6NTE8 343 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 IL20RBQ6UXL0 311 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 MBOAT1Q6ZNC8 495 aa10.09□□□□□ -0.79
SMARCC1-205ENST00000483847 SEM1Q6ZVN7 128 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms