RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 C1orf61Q13536 156 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 PRSS53Q2L4Q9 553 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 MPEG1Q2M385 716 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 CMPK2Q5EBM0 449 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 OR4C11Q6IEV9 310 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 FBXO42Q6P3S6 717 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 DNAJC14Q6Y2X3 702 aaPredicted RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 TMEM26Q6ZUK4 368 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 SFTPA2Q8IWL1 248 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 CLECL1Q8IZS7 167 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 TMEM102Q8N9M5 508 aaPredicted RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 PAPD5Q8NDF8 572 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 TNIP2Q8NFZ5 429 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 OR2T12Q8NG77 320 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 OR10A6Q8NH74 314 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 CANT1Q8WVQ1 401 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 PANX1Q96RD7 426 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 CENPKQ9BS16 269 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 DUSP15Q9H1R2 295 aaPredicted RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 RPF2Q9H7B2 306 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 GORASP2Q9H8Y8 452 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 SYNPO2LQ9H987 977 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 PRDM7Q9NQW5 492 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 ATAD3AQ9NVI7 634 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 ACTR10Q9NZ32 417 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 SH3BP4Q9P0V3 963 aa13.4□□□□□ -0.26
CLK3-204ENST00000483723 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.26
CLK3-204ENST00000483723 A0A0A6YYD5 115 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 C1orf226A1L170 272 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 OR6C74A6NCV1 312 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 FAM220BPB1ANY3 271 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 GPIP06744 558 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 IL3P08700 152 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 BCKDHBP21953 392 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 RPS15AP62244 130 aaKnown RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 KLC1Q07866 573 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 PLCL1Q15111 1095 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 SLC5A12Q1EHB4 618 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 OGFRL1Q5TC84 451 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 NUDT13Q86X67 352 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 MICU2Q8IYU8 434 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ADGRG5Q8IZF4 528 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 DTWD1Q8N5C7 304 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ZDHHC1Q8WTX9 485 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 PPCDCQ96CD2 204 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 MS4A6EQ96DS6 147 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 TM4SF19Q96DZ7 209 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 HSPA12BQ96MM6 686 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 PKP2Q99959 881 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 THEGQ9P2T0 379 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 CCDC163A0A0D9SF12 145 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ELOVL7A1L3X0 281 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 CLIC1O00299 241 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 NCK1P16333 377 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 POLR2CP19387 275 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 DDCP20711 480 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 MAPK12P53778 367 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 NXPH1P58417 271 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 SIM2Q14190 667 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 ELOCQ15369 112 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 MTX3Q5HYI7 312 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ABHD17CQ6PCB6 329 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ZNF621Q6ZSS3 439 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 SERPINA11Q86U17 422 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 C17orf82Q86X59 251 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 TICAM1Q8IUC6 712 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 KBTBD2Q8IY47 623 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 C10orf111Q8N326 155 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 SDR16C5Q8N3Y7 309 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 NT5CQ8TCD5 201 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 THAP11Q96EK4 314 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 AURKBQ96GD4 344 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 TEFMQ96QE5 360 aaKnown RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 EFHD1Q9BUP0 239 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 KLHL31Q9H511 634 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 PIF1Q9H611 641 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 COPS7BQ9H9Q2 264 aaPredicted RBP13.39□□□□□ -0.27
CLK3-204ENST00000483723 MUTYHQ9UIF7 546 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 PILRAQ9UKJ1 303 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
CLK3-204ENST00000483723 NUP214P35658 2090 aaPredicted RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 DHRS12A0PJE2 317 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 EVPLLA8MZ36 301 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 C2orf74A8MZ97 194 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 VILLO15195 856 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 TMPRSS11DO60235 418 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 SCELO95171 688 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ANXA6P08133 673 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 ABCB1P08183 1280 aaPredicted RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 ENGP17813 658 aa13.38□□□□□ -0.27
CLK3-204ENST00000483723 TSFMP43897 325 aaKnown RBP13.38□□□□□ -0.27
CLK3-204ENST00000483723 ZXDAP98168 799 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms