RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 C4orf33Q8N1A6 199 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 AMER3Q8N944 861 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 OR51Q1Q8NH59 317 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 NT5CQ8TCD5 201 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ACMSDQ8TDX5 336 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 PPP4R1Q8TF05 950 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 THAP4Q8WY91 577 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 PEX11GQ96HA9 241 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 IQCGQ9H095 443 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 ING2Q9H160 280 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 CENPHQ9H3R5 247 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 KLHL31Q9H511 634 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 IPPKQ9H8X2 491 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 WDR54Q9H977 334 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 MKKSQ9NPJ1 570 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 SEMA4BQ9NPR2 832 aaPredicted RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 C14orf105Q9NVL8 296 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 TMEM216Q9P0N5 145 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 G3BP2Q9UN86 482 aaKnown RBP9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 PLAAQ9Y263 795 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 KCNMB2Q9Y691 235 aa9.47□□□□□ -0.89
SPTLC1-206ENST00000482632 A8MT66 165 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 IDSB3KWA1 339 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 H0YIG0 161 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 MASP2O00187 686 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PSMD12O00232 456 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PRAMEF4O60810 478 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 JRKO75564 520 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CDC123O75794 336 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 IGHEP01854 428 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 SERPINA6P08185 405 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 GSTA1P08263 222 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 TSPAN8P19075 237 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CD22P20273 847 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 HNRNPH1P31943 449 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 RAP1GDS1P52306 607 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PLA2G16P53816 162 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 BTN3A2P78410 334 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 TGM3Q08188 693 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 NFATC3Q12968 1075 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CPSF6Q16630 551 aaKnown RBP eCLIP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 KRT71Q3SY84 523 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 TUBB8Q3ZCM7 444 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PRAMEF9Q5VWM5 478 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 ADNP2Q6IQ32 1131 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 GRHL2Q6ISB3 625 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 TRIM40Q6P9F5 258 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PDSS2Q86YH6 399 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CNPY4Q8N129 248 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 EXD3Q8N9H8 876 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CLEC1AQ8NC01 280 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 OR5T3Q8NGG3 340 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 C9orf43Q8TAL5 461 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 ADAMTS17Q8TE56 1095 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 UTP15Q8TED0 518 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 METTL21AQ8WXB1 218 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 CAVIN3Q969G5 261 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 UBE2E3Q969T4 207 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 GAL3ST3Q96A11 431 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 C8orf44Q96CB5 159 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 MTFMTQ96DP5 389 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 VPS50Q96JG6 964 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 NSUN5Q96P11 429 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 IP6K3Q96PC2 410 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 TRIM55Q9BYV6 548 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 SLC26A1Q9H2B4 701 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 EHD1Q9H4M9 534 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 NOL11Q9H8H0 719 aaKnown RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 ZNF71Q9NQZ8 489 aaPredicted RBP9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 SEMA3GQ9NS98 782 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 P4HTMQ9NXG6 502 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 FBXL4Q9UKA2 621 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 MKL2Q9ULH7 1088 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 SLC22A7Q9Y694 548 aa9.46□□□□□ -0.9
SPTLC1-206ENST00000482632 PCSK5Q92824 1860 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 A0A088AWK7 358 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 STX16-NPEPL1H3BU86 382 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 SAP18O00422 153 aaKnown RBP9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 E2F3O00716 465 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 STX16O14662 325 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 KLK8O60259 260 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 GALR3O60755 368 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 B4GALT2O60909 372 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 SPAG7O75391 227 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 ERLIN1O75477 346 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 CLEC3AO75596 197 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 SUPT7LO94864 414 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 RECKO95980 971 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 TGFB1P01137 390 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 MYL2P10916 166 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 ACPPP15309 386 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 KRT4P19013 534 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 EPORP19235 508 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 NR1D1P20393 614 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 ZNF10P21506 573 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 MMP11P24347 488 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 ITGA3P26006 1051 aa9.45□□□□□ -0.9
SPTLC1-206ENST00000482632 HPDP32754 393 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms