RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 CMPK1P30085 196 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 TRHRP34981 398 aaPredicted RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 GIPRP48546 466 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 KRT6CP48668 564 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 CCR8P51685 355 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 PPP1CAP62136 330 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 YBX1P67809 324 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 CSNK1G2P78368 415 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ABATP80404 500 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 MEF2AQ02078 507 aaPredicted RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 TEKQ02763 1124 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ZNF33BQ06732 778 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 PRDX1Q06830 199 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 TCF15Q12870 199 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 IFT88Q13099 833 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 NR1D2Q14995 579 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ABRAXAS2Q15018 415 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 CCDC6Q16204 474 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 SLC5A12Q1EHB4 618 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 LSM12Q3MHD2 195 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 PAGE2BQ5JRK9 111 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 C10orf62Q5T681 223 aaPredicted RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 FRG2Q64ET8 278 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ZNF425Q6IV72 752 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ZCCHC8Q6NZY4 707 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 MED27Q6P2C8 311 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 SPESP1Q6UW49 350 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 SCIMPQ6UWF3 145 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 TRIM73Q86UV7 250 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OOSP2Q86WS3 158 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 DDIASQ8IXT1 998 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 LAS2Q8IYD9 372 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OR4K1Q8NGD4 311 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OR2T11Q8NH01 316 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OR4C6Q8NH72 309 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OR10G6Q8NH81 332 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 WDR20Q8TBZ3 569 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 RSC1A1Q92681 617 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 SLC22A18Q96BI1 424 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 PPP1R36Q96LQ0 422 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 FRG2BQ96QU4 278 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 OR2A14Q96R47 310 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 HBEGFQ99075 208 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 CCT7Q99832 543 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 AIF1LQ9BQI0 150 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 LRFN3Q9BTN0 628 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 TBC1D10AQ9BXI6 508 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 ACPTQ9BZG2 426 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 NMUR2Q9GZQ4 415 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ELOVL6Q9H5J4 265 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 WDR55Q9H6Y2 383 aaPredicted RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 MRPS30Q9NP92 439 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 FARSBQ9NSD9 589 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 ACTR10Q9NZ32 417 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 GMEB2Q9UKD1 530 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 POMT2Q9UKY4 750 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 APOBEC2Q9Y235 224 aaKnown RBP6.37□□□□□ -1.39
USP48-208ENST00000479177 TSC22D4Q9Y3Q8 395 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 CCL27Q9Y4X3 112 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 KLK4Q9Y5K2 254 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 ENTPD2Q9Y5L3 495 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 RNF215Q9Y6U7 377 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 U3KQA8 63 aa6.37□□□□□ -1.39
USP48-208ENST00000479177 DMDP11532 3685 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 A0A0J9YY10 115 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ATP6AP2A0A1C7CYW4 349 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TRBC2A0A5B9 178 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 LNP1A1A4G5 178 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 GSAPA4D1B5 854 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 RHPN2P1A8MT19 583 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 C2orf74A8MZ97 194 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ISM1B1AKI9 464 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 NPIPB8E9PQR5 432 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 H7BY64 318 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 FCHO1O14526 889 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HAT1O14929 419 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TNFSF14O43557 240 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SIGLEC6O43699 453 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 NUDT21O43809 227 aaKnown RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 NRP2O60462 931 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 VPS4BO75351 444 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ULK1O75385 1050 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ATP6AP2O75787 350 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 DCTN3O75935 186 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 UBXN7O94888 489 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 PDYNP01213 254 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 PROS1P07225 676 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 RETP07949 1114 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ZNF883P0CG24 379 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HSD3B1P14060 373 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HRH2P25021 359 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HSD3B2P26439 372 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 GDNFP39905 211 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 GRIA3P42263 894 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 LSSP48449 732 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 NEK2P51955 445 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HMGCS1Q01581 520 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 CSTF3Q12996 717 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms