RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 FJX1Q86VR8 437 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 GPSM1Q86YR5 675 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 CRLF3Q8IUI8 442 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 CEP97Q8IW35 865 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 CTAGE3PQ8IX95 158 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 SNX31Q8N9S9 440 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 ANKRD53Q8N9V6 530 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 TMEM178AQ8NBL3 297 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 ANKRD49Q8WVL7 239 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 TSLPQ969D9 159 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 RHBDF1Q96CC6 855 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 PDLIM2Q96JY6 352 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 TAAR6Q96RI8 345 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 CPNE1Q99829 537 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 SLC6A16Q9GZN6 736 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 DERL2Q9GZP9 239 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 RAB17Q9H0T7 212 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 DNAJC11Q9NVH1 559 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 GPRC5BQ9NZH0 403 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 CD274Q9NZQ7 290 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 SUCOQ9UBS9 1254 aaKnown RBP8.21□□□□□ -1.1
XRCC6-208ENST00000478914 SEC14L3Q9UDX4 400 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 MRPS33Q9Y291 106 aaKnown RBP8.21□□□□□ -1.1
XRCC6-208ENST00000478914 PCDHGB6Q9Y5F9 930 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 GTF3C1Q12789 2109 aa8.21□□□□□ -1.1
XRCC6-208ENST00000478914 PRRC2CQ9Y520 2896 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TRGV8A0A0C4DH27 118 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SAGE2PA6NJ88 616 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 GABRR3A8MPY1 467 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 FCHO1O14526 889 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TP73O15350 636 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 RAD51CO43502 376 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 UNC5CO95185 931 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SPRP35270 261 aaPredicted RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 GP5P40197 560 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 GDF5P43026 501 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SLC6A12P48065 614 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TDGF1P3P51864 188 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ATP6V0D1P61421 351 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 BTN3A2P78410 334 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 BTG2P78543 158 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 MRPS25P82663 173 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TGM3Q08188 693 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CBLBQ13191 982 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TUBA3CQ13748 450 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SLBPQ14493 270 aaKnown RBP eCLIP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 OR1C1Q15619 314 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 HIST2H2ACQ16777 129 aaPredicted RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.2□□□□□ -1.17e-7■□□□□ 8.4
XRCC6-208ENST00000478914 CDKL4Q5MAI5 379 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 C1QL3Q5VWW1 255 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ZNF324BQ6AW86 544 aaPredicted RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 HIST2H2AA3Q6FI13 130 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 MTFR2Q6P444 385 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TRIM40Q6P9F5 258 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 TUBA3EQ6PEY2 450 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SLCO4C1Q6ZQN7 724 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 C3orf62Q6ZUJ4 267 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 RAPH1Q70E73 1250 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CCDC25Q86WR0 208 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 RPS19BP1Q86WX3 136 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 KLHDC8AQ8IYD2 350 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SHISA5Q8N114 240 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 LGI4Q8N135 537 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CA13Q8N1Q1 262 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SPATA4Q8NEY3 305 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ADAMTS18Q8TE60 1221 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 EXT2Q93063 718 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 GAL3ST3Q96A11 431 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 SEC16BQ96JE7 1060 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 GPR22Q99680 433 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 RBBP8Q99708 897 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 UNKQ9C0B0 810 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 PITHD1Q9GZP4 211 aaPredicted RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 KLHL31Q9H511 634 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CDCP1Q9H5V8 836 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 CAB39LQ9H9S4 337 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 PRDM9Q9NQV7 894 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 KLHL1Q9NR64 748 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 ANKRD10Q9NXR5 420 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 RNF112Q9ULX5 631 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 MTO1Q9Y2Z2 717 aaKnown RBP8.2□□□□□ -1.1
XRCC6-208ENST00000478914 POLEQ07864 2286 aa8.2□□□□□ -1.1
XRCC6-208ENST00000478914 A0A0G2JN53 185 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 TCRBV9S1A1TA0A576 114 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 TCRBV16S1A1N1A0A5B0 115 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 SYNDIG1LA6NDD5 238 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 FAM159BA6NKW6 160 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 A8MUA0 341 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 CXorf49A8MYA2 514 aaPredicted RBP8.19□□□□□ -1.1
XRCC6-208ENST00000478914 FAM227AF5H4B4 570 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 CLDN4O14493 209 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
XRCC6-208ENST00000478914 PHGDHO43175 533 aaKnown RBP8.19□□□□□ -1.1
XRCC6-208ENST00000478914 B3GALT2O43825 422 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms