RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ABCB8Q9NUT2 735 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 PTTG2Q9NZH5 202 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 CACNG4Q9UBN1 327 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 MYH1P12882 1939 aa3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 COL1A1P02452 1464 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGKV3D-15A0A087WSY6 115 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 A0A1W2PPW3 197 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 SLC33A1O00400 549 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 FLRT2O43155 660 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 PPIP5K2O43314 1243 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 SNX3O60493 162 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 RPS6KA5O75582 802 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 TSHBP01222 138 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 NR3C1P04150 777 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 PRSS1P07477 247 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 EPORP19235 508 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 CA6P23280 308 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 TIMP3P35625 211 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 PRELPP51888 382 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 MAZP56270 477 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ASIC1P78348 528 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 MORF4L2Q15014 288 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 PHKG1Q16816 387 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF674Q2M3X9 581 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 GLRA4Q5JXX5 417 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 DCAF10Q5QP82 559 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ANKRD33Q7Z3H0 272 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCDC91Q7Z6B0 441 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 SNX32Q86XE0 403 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 SIAH3Q8IW03 269 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 KLHDC9Q8NEP7 349 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR10Q1Q8NGQ4 319 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 RIT1Q92963 219 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 EXOC4Q96A65 974 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF350Q9GZX5 532 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ACTL8Q9H568 366 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 TLE6Q9H808 572 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 MINDY3Q9H8M7 445 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 UPF2Q9HAU5 1272 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 FAM118AQ9NWS6 357 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 CWC25Q9NXE8 425 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 SLCO1C1Q9NYB5 712 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 TRMT112Q9UI30 125 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 STUB1Q9UNE7 303 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 FAF1Q9UNN5 650 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 ATP6V0A2Q9Y487 856 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 PHIPQ8WWQ0 1821 aa3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 DDX60LQ5H9U9 1706 aaKnown RBP3.64□□□□□ -1.83
CDC42BPA-212ENST00000478573 MED23Q9ULK4 1368 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SMCHD1A6NHR9 2005 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ANKRD61A6NGH8 418 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SDR42E2A6NKP2 422 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 C2orf81A6NN90 581 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 C2CD4DB7Z1M9 353 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ATP6V0E1O15342 81 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 PRAF2O60831 178 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 BBOX1O75936 387 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 GOSR1O95249 250 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 BAG2O95816 211 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ATP6V1B1P15313 513 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 PSMB4P28070 264 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 FRKP42685 505 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 CDH11P55287 796 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 TAF10Q12962 218 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 TAF13Q15543 124 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 UGP2Q16851 508 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 CCDC152Q4G0S7 254 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 PDLIM3Q53GG5 364 aaPredicted RBP3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF789Q5FWF6 425 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 OR4A47Q6IF82 309 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 AMIGO1Q86WK6 493 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 UNC45BQ8IWX7 931 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 TUSC5Q8IXB3 177 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SYCP3Q8IZU3 236 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 LGI2Q8N0V4 545 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 GPC2Q8N158 579 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 AMER3Q8N944 861 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 UXS1Q8NBZ7 420 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 NOA1Q8NC60 698 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 NCOA7Q8NI08 942 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 TEKT1Q969V4 418 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 CENPTQ96BT3 561 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SNRNP40Q96DI7 357 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 MAP3K3Q99759 626 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 MTMR12Q9C0I1 747 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZMYND12Q9H0C1 365 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 IL1RAPL2Q9NP60 686 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 ECHDC1Q9NTX5 307 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 DNAJC17Q9NVM6 304 aaKnown RBP3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 FLRT3Q9NZU0 649 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SEPT10Q9P0V9 454 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 MTRRQ9UBK8 725 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 LOC285556D6RIA3 1793 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 SIPA1L1O43166 1804 aa3.63□□□□□ -1.83
CDC42BPA-212ENST00000478573 CASP8AP2Q9UKL3 1982 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 IGLV9-49A0A0B4J1Y8 123 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 SERINC4A6NH21 518 aa3.62□□□□□ -1.83
CDC42BPA-212ENST00000478573 ZNF263O14978 683 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms