RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 STAM2O75886 525 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 ATP5BP06576 529 aaKnown RBP1.9□□□□□ -2.11
HPS3-205ENST00000478525 AZGP1P25311 298 aaKnown RBP1.9□□□□□ -2.11
HPS3-205ENST00000478525 GDF1P27539 372 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 NAP1L1P55209 391 aaKnown RBP1.9□□□□□ -2.11
HPS3-205ENST00000478525 UBXN2AP68543 259 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 MECOMQ03112 1051 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 CRMP1Q14194 572 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 NTRK2Q16620 822 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 XKR4Q5GH76 650 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 C6orf163Q5TEZ5 329 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 Q71RC1 249 aaPredicted RBP1.9□□□□□ -2.11
HPS3-205ENST00000478525 TEX26Q8N6G2 289 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 APPL2Q8NEU8 664 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 TSPAN14Q8NG11 270 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 KIR2DL5BQ8NHK3 375 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 RCHY1Q96PM5 261 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 TEX12Q9BXU0 123 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 OLAHQ9NV23 265 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 HAO2Q9NYQ3 351 aa1.9□□□□□ -2.11
HPS3-205ENST00000478525 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 EPOPA6NHQ4 379 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 LMO7DNF2Z398 122 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 H3BMM5 538 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 FBP2O00757 339 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 AP5Z1O43299 807 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 ZNF861PO60384 105 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 SAT1P21673 171 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 PEX3P56589 373 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 STX17P56962 302 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 CACNG1Q06432 222 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 KIAA0040Q15053 153 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 PTGISQ16647 500 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 ZNF658BQ4V348 819 aaPredicted RBP1.89□□□□□ -2.11
HPS3-205ENST00000478525 SUSD4Q5VX71 490 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 DHRS11Q6UWP2 260 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 NUFIP2Q7Z417 695 aaKnown RBP1.89□□□□□ -2.11
HPS3-205ENST00000478525 PIGWQ7Z7B1 504 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 FBXO16Q8IX29 292 aaPredicted RBP1.89□□□□□ -2.11
HPS3-205ENST00000478525 OR2L5Q8NG80 312 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 OR6F1Q8NGZ6 308 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 RNF138Q8WVD3 245 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 PRPF31Q8WWY3 499 aaKnown RBP1.89□□□□□ -2.11
HPS3-205ENST00000478525 PYCR2Q96C36 320 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 MAGEB18Q96M61 343 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 HSD17B14Q9BPX1 270 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 CNOT10Q9H9A5 744 aaKnown RBP1.89□□□□□ -2.11
HPS3-205ENST00000478525 GIMAP4Q9NUV9 329 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 ZNF319Q9P2F9 582 aa1.89□□□□□ -2.11
HPS3-205ENST00000478525 NIP7Q9Y221 180 aaKnown RBP eCLIP1.89□□□□□ -2.11
HPS3-205ENST00000478525 PINLYPA6NC86 204 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 BRCC3P46736 316 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 EVCP57679 992 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 TLE4Q04727 773 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 REP15Q6BDI9 236 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 NAA16Q6N069 864 aaPredicted RBP1.88□□□□□ -2.11
HPS3-205ENST00000478525 TTC27Q6P3X3 843 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 ANKRD33Q7Z3H0 272 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 HDAC2Q92769 488 aaKnown RBP1.88□□□□□ -2.11
HPS3-205ENST00000478525 ST6GALNAC6Q969X2 333 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 ZBED6CLQ96FA7 236 aaPredicted RBP1.88□□□□□ -2.11
HPS3-205ENST00000478525 PGM2Q96G03 612 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 PLEKHA3Q9HB20 300 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 EXOC1Q9NV70 894 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 UBQLN2Q9UHD9 624 aa1.88□□□□□ -2.11
HPS3-205ENST00000478525 GLOD5A6NK44 160 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 TCP10L2B9ZVM9 353 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 CLDN4O14493 209 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 KIF5CO60282 957 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 DOK2O60496 412 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 FRAT2O75474 233 aaPredicted RBP1.87□□□□□ -2.11
HPS3-205ENST00000478525 APBB3O95704 486 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 ANGPTL1O95841 491 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 NR2C1P13056 603 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 RPL9P32969 192 aaKnown RBP1.87□□□□□ -2.11
HPS3-205ENST00000478525 UBASH3AP57075 661 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 CXCL6P80162 114 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 GRB14Q14449 540 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 RBBP7Q16576 425 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 C17orf58Q2M2W7 97 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 LACTB2Q53H82 288 aaPredicted RBP1.87□□□□□ -2.11
HPS3-205ENST00000478525 FAAH2Q6GMR7 532 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 MACC1Q6ZN28 852 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 ZBTB49Q6ZSB9 765 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 TRMT11Q7Z4G4 463 aaKnown RBP1.87□□□□□ -2.11
HPS3-205ENST00000478525 NME8Q8N427 588 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 ANKRD13CQ8N6S4 541 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 CCDC63Q8NA47 563 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 ZNRF1Q8ND25 227 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 AFAP1L1Q8TED9 768 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 TEKT4Q8WW24 435 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 SEPT1Q8WYJ6 367 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 ANKRD27Q96NW4 1050 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 PCDHB18PQ96TA0 734 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 PINK1Q9BXM7 581 aa1.87□□□□□ -2.11
HPS3-205ENST00000478525 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.87□□□□□ -2.11
HPS3-205ENST00000478525 PHPT1Q9NRX4 125 aaPredicted RBP1.87□□□□□ -2.11
HPS3-205ENST00000478525 ZFP92A6NM28 416 aa1.86□□□□□ -2.11
HPS3-205ENST00000478525 A8MV72 311 aaPredicted RBP1.86□□□□□ -2.11
HPS3-205ENST00000478525 LRP3O75074 770 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms