RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PDIA2Q13087 525 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC25A25Q6KCM7 469 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 TRMT10BQ6PF06 316 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 MRGPRGQ86SM5 289 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 ZC3HC1Q86WB0 502 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 IGDCC3Q8IVU1 814 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 POGLUT1Q8NBL1 392 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 ELP5Q8TE02 316 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 UTP15Q8TED0 518 aaKnown RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 GAL3ST3Q96A11 431 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 CCDC120Q96HB5 630 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 GPR137Q96N19 417 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 NAPGQ99747 312 aaPredicted RBP13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 RHOJQ9H4E5 214 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 GPAMQ9HCL2 828 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC17A6Q9P2U8 582 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SLC22A14Q9Y267 594 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 SAR1BQ9Y6B6 198 aa13.56□□□□□ -0.24
SMARCE1-209ENST00000478349 EFCAB8A8MWE9 144 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 WDR47O94967 919 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 SP1P08047 785 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 ABOP16442 354 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 IVDP26440 423 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 TNFRSF8P28908 595 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 RAB8AP61006 207 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 GNG11P61952 73 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 SNRPNP63162 240 aaKnown RBP13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 PMP22Q01453 160 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 POU4F1Q01851 419 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 GHDCQ8N2G8 530 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 C7orf57Q8NEG2 295 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 ITLN2Q8WWU7 325 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 CCT6BQ92526 530 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 SIGLEC12Q96PQ1 595 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 CCDC77Q9BR77 488 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 DEFB126Q9BYW3 111 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 CDCP1Q9H5V8 836 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 ANKRD10Q9NXR5 420 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 GPRC5BQ9NZH0 403 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 SH3BGRL2Q9UJC5 107 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 KLF13Q9Y2Y9 288 aaPredicted RBP13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 DOCK10Q96BY6 2186 aa13.55□□□□□ -0.24
SMARCE1-209ENST00000478349 CENPEQ02224 2701 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 TCRBV16S1A1N1A0A5B0 115 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 OR2W5A6NFC9 320 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 NME2P1O60361 137 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 S100BP04271 92 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 COX6B1P14854 86 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 NME2P22392 152 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 HNF4AP41235 474 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 CLCN2P51788 898 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 HSD17B7P56937 341 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 OLR1P78380 273 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 MAPKAPK3Q16644 382 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 CDKL4Q5MAI5 379 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 SPINK14Q6IE38 97 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 TRIM40Q6P9F5 258 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 GDF7Q7Z4P5 450 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 GALNTL5Q7Z4T8 443 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 ANKMY2Q8IV38 441 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 SPNS2Q8IVW8 549 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 ZBED8Q8IZ13 594 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 FRMD6Q96NE9 622 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 TRIM31Q9BZY9 425 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 RHBGQ9H310 441 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 COPS7BQ9H9Q2 264 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 GRPEL1Q9HAV7 217 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
SMARCE1-209ENST00000478349 HEATR5BQ9P2D3 2071 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 IGKV3D-11A0A0A0MRZ8 115 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ANKDD1BA6NHY2 528 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 NPIPA5E9PKD4 350 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 KLRC4-KLRK1H3BQV0 150 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 CDC7O00311 574 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 PRRG2O14669 202 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 CLGNO14967 610 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ERI3O43414 337 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 B3GALT2O43825 422 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 NEURL1O76050 574 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 C1GALT1C1LP0DN25 315 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 MAOAP21397 527 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 HTR1EP28566 365 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 TPP2P29144 1249 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 TRHRP34981 398 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 HLCSP50747 726 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ATP6V0D1P61421 351 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 BTN3A2P78410 334 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 TSNQ15631 228 aaKnown RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 ZXDCQ2QGD7 858 aaPredicted RBP13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 PAGE2BQ5JRK9 111 aa13.53□□□□□ -0.24
SMARCE1-209ENST00000478349 SPPL2CQ8IUH8 684 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms