RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 IL10P22301 178 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 DNASE1P24855 282 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ARNTP27540 789 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 UQCRC1P31930 480 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ZFP36L2P47974 494 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SSR4P51571 173 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CCR8P51685 355 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CLCN2P51788 898 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 RAB8AP61006 207 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 PPIAP62937 165 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SARNPP82979 210 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 RGS1Q08116 209 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 FOXD4Q12950 439 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 NAE1Q13564 534 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 DHX34Q14147 1143 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CMPK2Q5EBM0 449 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HECTD2Q5U5R9 776 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 KIAA0930Q6ICG6 404 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 NEPROQ6NW34 567 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 AGTRAPQ6RW13 159 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CENPUQ71F23 418 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ABHD13Q7L211 337 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 MDGA2Q7Z553 956 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF227Q86WZ6 799 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC13A5Q86YT5 568 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CILP2Q8IUL8 1156 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 DENND6AQ8IWF6 608 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 LRRC56Q8IYG6 542 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 TXLNBQ8N3L3 684 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 MFSD9Q8NBP5 474 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ZNF740Q8NDX6 193 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 MYRIPQ8NFW9 859 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 GOT1L1Q8NHS2 421 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 GIMAP7Q8NHV1 300 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ASB11Q8WXH4 323 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ASB15Q8WXK1 588 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HIST1H2AHQ96KK5 128 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SMC6Q96SB8 1091 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HIST1H2AJQ99878 128 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 TREX2Q9BQ50 279 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 GPATCH1Q9BRR8 931 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 H2AFJQ9BTM1 129 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 TMUB1Q9BVT8 246 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 FRMD8P1Q9BZ68 369 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 LIME1Q9H400 295 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 LDAHQ9H6V9 325 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC24A3Q9HC58 644 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 EIF2B3Q9NR50 452 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 PNPLA3Q9NST1 481 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 INTS10Q9NVR2 710 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 TRMT6Q9UJA5 497 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ADAMTS6Q9UKP5 1117 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 REXO2Q9Y3B8 237 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 HRH3Q9Y5N1 445 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 CAPN6Q9Y6Q1 641 aa6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 NIPBLQ6KC79 2804 aaeCLIP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 ANKHD1Q8IWZ3 2542 aaKnown RBP6.24□□□□□ -1.41
RTFDC1-206ENST00000477485 FLNAP21333 2647 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 TMEM200CA6NKL6 621 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 FIGNL2A6NMB9 653 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 A8MVJ9 347 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 GOLGA8MH3BSY2 632 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 KLK8O60259 260 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 GALR3O60755 368 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 DNAJB6O75190 326 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 RNH1P13489 461 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 IGFBP2P18065 325 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 CCND1P24385 295 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ACVR2AP27037 513 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 SKIV2L2P42285 1042 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC1A2P43004 574 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 RGS4P49798 205 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 NR0B1P51843 470 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ADARP55265 1226 aaKnown RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 MPP1Q00013 466 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 TFF3Q07654 80 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 SLC13A2Q13183 592 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 BMPR2Q13873 1038 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 RPS6KA1Q15418 735 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 TRIP13Q15645 432 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 GXYLT1Q4G148 440 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 IL20RBQ6UXL0 311 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 B3GNT6Q6ZMB0 384 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 C16orf47Q6ZP98 133 aaPredicted RBP6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 QSOX2Q6ZRP7 698 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 PCGF5Q86SE9 256 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 MYO1HQ8N1T3 1032 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 ACBD4Q8NC06 268 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 PSD4Q8NDX1 1056 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 CD200R1Q8TD46 325 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 CCT6BQ92526 530 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 KCNJ9Q92806 393 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 NINJ1Q92982 152 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 NCLNQ969V3 563 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 PYCR2Q96C36 320 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 TM4SF19Q96DZ7 209 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 HES6Q96HZ4 224 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 PDLIM2Q96JY6 352 aa6.23□□□□□ -1.41
RTFDC1-206ENST00000477485 FAR2Q96K12 515 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms