RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 EXOSC4Q9NPD3 245 aaKnown RBP14.69□□□□□ -0.06
CLSTN1-205ENST00000477264 MS4A12Q9NXJ0 267 aa14.69□□□□□ -0.06
CLSTN1-205ENST00000477264 GLTPQ9NZD2 209 aa14.69□□□□□ -0.06
CLSTN1-205ENST00000477264 CORO2BQ9UQ03 480 aa14.69□□□□□ -0.06
CLSTN1-205ENST00000477264 CFAP20Q9Y6A4 193 aaKnown RBP14.69□□□□□ -0.06
CLSTN1-205ENST00000477264 NPIPB8E9PQR5 432 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PRMT3O60678 531 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PRAMEF11O60813 436 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 RAMP2O60895 175 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PPIBP23284 216 aaKnown RBP14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 RGS4P49798 205 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 KCNJ10P78508 379 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 DAB2P98082 770 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PPIGQ13427 754 aaKnown RBP eCLIP14.68□□□□□ -0.063e-16■■■□□ 15.6
CLSTN1-205ENST00000477264 TATDN3Q17R31 274 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 AMIGO1Q86WK6 493 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PTOV1Q86YD1 416 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FBXL6Q8N531 539 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 ULK4Q96C45 1275 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FEVQ99581 238 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 BEX2Q9BXY8 128 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FAM126AQ9BYI3 521 aaPredicted RBP14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 HHATLQ9HCP6 504 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SH3BP4Q9P0V3 963 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 ABHD14A-ACY1A0A1B0GW23 586 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FFAR3O14843 346 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SYN3O14994 580 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 GPR42O15529 346 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SUV39H1O43463 412 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 CCNB2O95067 398 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PIRTP0C851 137 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 LPOP22079 712 aaPredicted RBP14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PTBP1P26599 531 aaKnown RBP eCLIP14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 KIR2DL3P43628 341 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 KIR3DL1P43629 444 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 HSPA7P48741 367 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 CLCN7P51798 805 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SLC14A1Q13336 389 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 DDI2Q5TDH0 399 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FAM205BPQ63HN1 556 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 PDE12Q6L8Q7 609 aaKnown RBP14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SYNPOQ8N3V7 929 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 DUSP18Q8NEJ0 188 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 CLHC1Q8NHS4 586 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 TMEM175Q9BSA9 504 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 CD244Q9BZW8 370 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 WWOXQ9NZC7 414 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 SSR3Q9UNL2 185 aa14.68□□□□□ -0.06
CLSTN1-205ENST00000477264 FABP12A6NFH5 140 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 KIAA0355O15063 1070 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 CSF2RAP15509 400 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 CTPS1P17812 591 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ENGP17813 658 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MAPKAPK2P49137 400 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MAPK12P53778 367 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 CRISP3P54108 245 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MRPL28Q13084 256 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 Q6ZPB1 254 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 SLC25A46Q96AG3 418 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TMEM80Q96HE8 168 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 SPATA17Q96L03 361 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MAGEB10Q96LZ2 347 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ACAT2Q9BWD1 397 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 NDUFB11Q9NX14 153 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ALG5Q9Y673 324 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 H7C0S8 307 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 FPGTO14772 594 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MYL12BO14950 172 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 EFCAB14O75071 495 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 SLC43A1O75387 559 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MTRF1O75570 445 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TSPAN9O75954 239 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 OR7A10O76100 309 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MYL12AP19105 171 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MC4RP32245 332 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 PCGF2P35227 344 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ETV3P41162 512 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 SLC11A1P49279 550 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 CLDN20P56880 219 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 RRAS2P62070 204 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 SRSF11Q05519 484 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ELAVL2Q12926 359 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ELOAQ14241 798 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TEAD4Q15561 434 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 C18orf21Q32NC0 220 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ZBTB37Q5TC79 503 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 RNLSQ5VYX0 342 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 PSAPL1Q6NUJ1 521 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 ANKRD46Q86W74 232 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 PIAS4Q8N2W9 510 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TP53I13Q8NBR0 393 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 OR4C15Q8NGM1 316 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 UTP15Q8TED0 518 aaKnown RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 AP3S1Q92572 193 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TRIM43Q96BQ3 446 aaPredicted RBP14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 CMTM7Q96FZ5 175 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 DOHHQ9BU89 302 aa14.67□□□□□ -0.06
CLSTN1-205ENST00000477264 TRIM45Q9H8W5 580 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms