RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 GRB7Q14451 532 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 EXT1Q16394 746 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZXDCQ2QGD7 858 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 KRTCAP3Q53RY4 240 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 MFSD4BQ5TF39 518 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 LRRC8BQ6P9F7 803 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 DRICH1Q6PGQ1 229 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 LHFPL2Q6ZUX7 228 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZGRF1Q86YA3 2104 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 WFDC3Q8IUB2 231 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 SRRM1Q8IYB3 904 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ACRBPQ8NEB7 543 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 BRIX1Q8TDN6 353 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ASB11Q8WXH4 323 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 MAGED4Q96JG8 741 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF700Q9H0M5 742 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 STMN3Q9NZ72 180 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PACSIN2Q9UNF0 486 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 R3HDM2Q9Y2K5 976 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF281Q9Y2X9 895 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PCDHGB6Q9Y5F9 930 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 LOC102723996A0A087X1L8 192 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 MYO1CO00159 1063 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 EIF3FO00303 357 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CCL21O00585 134 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 ZG16O60844 167 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CTSVO60911 334 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 ALOX12BO75342 701 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 PSIP1O75475 530 aaKnown RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 KLHL18O94889 574 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 VAPBO95292 243 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 SYF2O95926 243 aaKnown RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 MPC1LP0DKB6 136 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CD8BP10966 210 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 COX6A1P12074 109 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 AGAP20933 346 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CCND1P24385 295 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 SLC26A3P40879 764 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 RPS15AP62244 130 aaKnown RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 MEF2AQ02078 507 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 EEF1A2Q05639 463 aaKnown RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 SNX1Q13596 522 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 MEP1AQ16819 746 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 PRTGQ2VWP7 1150 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 ICE2Q659A1 982 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 FRMPD2BQ6IN97 320 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CASC4Q6P4E1 433 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 RAD9BQ6WBX8 426 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 TMEM178AQ8NBL3 297 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CAMKVQ8NCB2 501 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 FBXO15Q8NCQ5 510 aaPredicted RBP6.87□□□□□ -1.31
BRCA1-214ENST00000477152 C1orf54Q8WWF1 131 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 ATG4AQ8WYN0 398 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 G6PC3Q9BUM1 346 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 KIFC1Q9BW19 673 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 ACAT2Q9BWD1 397 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 TREX1Q9NSU2 369 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 TMEM184CQ9NVA4 438 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 CIDEBQ9UHD4 219 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 PCSK5Q92824 1860 aa6.87□□□□□ -1.31
BRCA1-214ENST00000477152 AQP7O14520 342 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 UNC5CO95185 931 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 HIST1H2AGP0C0S8 130 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ERGP11308 486 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TPSB2P20231 275 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 HIST1H2ADP20671 130 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 BCL6P41182 706 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 RGS4P49798 205 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 GPR85P60893 370 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF33BQ06732 778 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ACTN3Q08043 901 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 SEMA3AQ14563 771 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TPSAB1Q15661 275 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TYSND1Q2T9J0 566 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 KLHL38Q2WGJ6 581 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 KIAA0930Q6ICG6 404 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 HIBCHQ6NVY1 386 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 MRGPRGQ86SM5 289 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 LDB1Q86U70 411 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 PAQR7Q86WK9 346 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ZC3H7AQ8IWR0 971 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 SLC5A8Q8N695 610 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 SIRT6Q8N6T7 355 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 LKAAEAR1Q8TD35 194 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 C8orf44Q96CB5 159 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 HIST1H2AHQ96KK5 128 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF778Q96MU6 729 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 HIST1H2AJQ99878 128 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 UTP23Q9BRU9 249 aaKnown RBP6.86□□□□□ -1.31
BRCA1-214ENST00000477152 H2AFJQ9BTM1 129 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 BRINP2Q9C0B6 783 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 KCNK13Q9HB14 408 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 ANKHQ9HCJ1 492 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 FBLN5Q9UBX5 448 aa6.86□□□□□ -1.31
BRCA1-214ENST00000477152 TAC3Q9UHF0 121 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms