RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 VN1R1Q9GZP7 353 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 RHBGQ9H310 441 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 OR51B5Q9H339 312 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 EHD1Q9H4M9 534 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 NT5DC2Q9H857 520 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 IPPKQ9H8X2 491 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 ZBTB20Q9HC78 741 aaPredicted RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 ANKHQ9HCJ1 492 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 SEMA4BQ9NPR2 832 aaPredicted RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 PLAAQ9Y263 795 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TP53TG5Q9Y2B4 290 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 PADI2Q9Y2J8 665 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 NUP210LQ5VU65 1888 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 ERI3O43414 337 aaKnown RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 TGFB1P01137 390 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 PROCP04070 461 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 MMP11P24347 488 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 CERS1P27544 350 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 AVPR1BP47901 424 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 PLA2G16P53816 162 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 BTN3A2P78410 334 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 BTG2P78543 158 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 OCA2Q04671 838 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 RGS1Q08116 209 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 PCDH1Q08174 1060 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 NFATC3Q12968 1075 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 DDX39BQ13838 428 aaKnown RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 TBCCQ15814 346 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 ADPRMQ3LIE5 342 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 GRHL2Q6ISB3 625 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 LETMD1Q6P1Q0 360 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 EMBQ6PCB8 327 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 MYLK4Q86YV6 388 aaPredicted RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 CA13Q8N1Q1 262 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 TRPV3Q8NET8 790 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 FDCSPQ8NFU4 85 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 THAP4Q8WY91 577 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
APTX-220ENST00000476858 MTFMTQ96DP5 389 aaKnown RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 MVB12AQ96EY5 273 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 MTERF1Q99551 399 aaKnown RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 EFCAB11Q9BUY7 163 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 MS4A8Q9BY19 250 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 TGIF2Q9GZN2 237 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 TNFRSF12AQ9NP84 129 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 MKKSQ9NPJ1 570 aaPredicted RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 PRDM7Q9NQW5 492 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 FARSBQ9NSD9 589 aaKnown RBP11.74□□□□□ -0.53
APTX-220ENST00000476858 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 CDC14AQ9UNH5 594 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 ANGPTL3Q9Y5C1 460 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 SCN2AQ99250 2005 aa11.74□□□□□ -0.53
APTX-220ENST00000476858 H0YIG0 161 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 AGPSO00116 658 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 STX16O14662 325 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 PLIN3O60664 434 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 B4GALT2O60909 372 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 SMIM24O75264 130 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CLEC3AO75596 197 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 PIM1P11309 404 aaPredicted RBP11.73□□□□□ -0.53
APTX-220ENST00000476858 COX6A1P12074 109 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 KRT15P19012 456 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 KRT4P19013 534 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CD97P48960 835 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ST13P50502 369 aaKnown RBP11.73□□□□□ -0.53
APTX-220ENST00000476858 EMP2P54851 167 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 RPS13P62277 151 aaKnown RBP11.73□□□□□ -0.53
APTX-220ENST00000476858 RHAGQ02094 409 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 SLC18A2Q05940 514 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ZNF844Q08AG5 666 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 PCOLCEQ15113 449 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
APTX-220ENST00000476858 RBBP7Q16576 425 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CPSF6Q16630 551 aaKnown RBP eCLIP11.73□□□□□ -0.53
APTX-220ENST00000476858 DCAF10Q5QP82 559 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 LGSNQ5TDP6 509 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ABHD17CQ6PCB6 329 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 RAB43Q86YS6 212 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 KRT78Q8N1N4 520 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 MREGQ8N565 214 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 L3MBTL4Q8NA19 623 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 HUS1BQ8NHY5 278 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ACMSDQ8TDX5 336 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 TRPC4APQ8TEL6 797 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 UCN3Q969E3 161 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 WBP1Q96G27 269 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CSF3RQ99062 836 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 C17orf62Q9BQA9 187 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CCDC77Q9BR77 488 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CAPS2Q9BXY5 557 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ACTR8Q9H981 624 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 ZNF160Q9HCG1 818 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 SLC17A7Q9P2U7 560 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CLDN16Q9Y5I7 305 aa11.73□□□□□ -0.53
APTX-220ENST00000476858 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
APTX-220ENST00000476858 ANKDD1BA6NHY2 528 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms