RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SDCCAG8Q86SQ7 713 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TMEM156Q8N614 296 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 MFSD9Q8NBP5 474 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 APCDD1LQ8NCL9 501 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 ZNF740Q8NDX6 193 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 GOT1L1Q8NHS2 421 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 GIMAP7Q8NHV1 300 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 CREB3L4Q8TEY5 395 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 MFSD3Q96ES6 412 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 C18orf12Q96KH6 178 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 SMC6Q96SB8 1091 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TCF12Q99081 682 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 FAM129AQ9BZQ8 928 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 IL22Q9GZX6 179 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
BRCA1-213ENST00000476777 CCDC177Q9NQR7 707 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-213ENST00000476777 A0A0G2JMM0 328 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 TRBV11-1A0A0K0K1C0 115 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 A0A1B0GVC2 190 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 A0A1W2PPB8 328 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 A0A1W2PRS3 328 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 TCRBV16S1A1N1A0A5B0 115 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 GRID2IPA4D2P6 1211 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 FAM166BA8MTA8 275 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 KIR3DP1A8MWS1 328 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 KIAA1324LA8MWY0 1029 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-213ENST00000476777 E5RI56 91 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 BCKDKO14874 412 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 ITGA10O75578 1167 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 ATE1O95260 518 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 B3GALT4O96024 378 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 INHBBP09529 407 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 SLC35G6P0C7Q6 338 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 MAOAP21397 527 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 HOXC12P31275 282 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 CUL1Q13616 776 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 DEFB134Q4QY38 66 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 CES3Q6UWW8 571 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 CYHR1Q6ZMK1 362 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 RGS9BPQ6ZS82 235 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 CENPUQ71F23 418 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 CCDC170Q8IYT3 715 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 PRELID2Q8N945 189 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 TC2NQ8N9U0 490 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 PSD4Q8NDX1 1056 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 ACRBPQ8NEB7 543 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 KIFC1Q9BW19 673 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 PCBD2Q9H0N5 130 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 KCMF1Q9P0J7 381 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 PACSIN2Q9UNF0 486 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-213ENST00000476777 MED16Q9Y2X0 877 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 LIPGQ9Y5X9 500 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 ROS1P08922 2347 aa10.58□□□□□ -0.72
BRCA1-213ENST00000476777 A8MUA0 341 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 BTNL10A8MVZ5 291 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 SYT5O00445 386 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 PFDN6O15212 129 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 SLC16A5O15375 505 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 LIASO43766 372 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ZBTB14O43829 449 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 GLSO94925 669 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 IGHG3P01860 377 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 RAF1P04049 648 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 MPC1LP0DKB6 136 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ALOX12P18054 663 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ADSLP30566 484 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 PEX19P40855 299 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 SSR4P51571 173 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 CLCN2P51788 898 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 PLGLB1Q02325 96 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 TTLL9Q3SXZ7 439 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 CLEC9AQ6UXN8 241 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 TRILQ7L0X0 811 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 WDR53Q7Z5U6 358 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 SLC22A16Q86VW1 577 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 C17orf64Q86WR6 236 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 KRTAP1-3Q8IUG1 177 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 CILP2Q8IUL8 1156 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 B3GNT7Q8NFL0 401 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 OR2M7Q8NG81 312 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 SLCO2A1Q92959 643 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 TTTY12Q9BZ98 90 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 DMRT3Q9NQL9 472 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 NECTIN3Q9NQS3 549 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 BFARQ9NZS9 450 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 KLHL42Q9P2K6 505 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF223Q9UK11 482 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 FBXW2Q9UKT8 454 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 CBLCQ9ULV8 474 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 PPIEQ9UNP9 301 aaKnown RBP10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ARHGAP21Q5T5U3 1957 aa10.57□□□□□ -0.72
BRCA1-213ENST00000476777 ACOT7O00154 380 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 AQP7O14520 342 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 NDUFS4O43181 175 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 MYO1DO94832 1006 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 HEXAP06865 529 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms