RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 COPG2Q9UBF2 871 aa10.15□□□□□ -0.78
SEC13-214ENST00000476597 OSGIN2Q9Y236 505 aa10.15□□□□□ -0.78
SEC13-214ENST00000476597 UTP11Q9Y3A2 253 aaKnown RBP10.15□□□□□ -0.78
SEC13-214ENST00000476597 MDC1Q14676 2089 aaKnown RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 A1L4Q6 167 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 NCF1BA6NI72 391 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 NCF1CA8MVU1 366 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 C4orf51C9J302 202 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 PHGDHO43175 533 aaKnown RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 LRRTM2O43300 516 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 PRMT3O60678 531 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 STSP08842 583 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 NCF1P14598 390 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 STMN1P16949 149 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 SPRP35270 261 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 CD96P40200 585 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 MAGEA4P43358 317 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 KCNC1P48547 511 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 BTG2P78543 158 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 SLBPQ14493 270 aaKnown RBP eCLIP10.14□□□□□ -0.79
SEC13-214ENST00000476597 TRADDQ15628 312 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 MEP1AQ16819 746 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 TOR1AIP1Q5JTV8 583 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 GRTP1Q5TC63 336 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 FCRLBQ6BAA4 426 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 ZDHHC24Q6UX98 284 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 TMIGD1Q6UXZ0 262 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 SYT10Q6XYQ8 523 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 QSOX2Q6ZRP7 698 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 ZNF572Q7Z3I7 529 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 GPSM1Q86YR5 675 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 BEST3Q8N1M1 668 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 C17orf53Q8N3J3 647 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 TCAIMQ8N3R3 496 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 TTLQ8NG68 377 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 FBXO25Q8TCJ0 367 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 ELP5Q8TE02 316 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 NR4A3Q92570 626 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 SEC16BQ96JE7 1060 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 TMEM79Q9BSE2 394 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 PITHD1Q9GZP4 211 aaPredicted RBP10.14□□□□□ -0.79
SEC13-214ENST00000476597 EHD1Q9H4M9 534 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 GPRC5BQ9NZH0 403 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 ABI3Q9P2A4 366 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 TXNDC16Q9P2K2 825 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 PCDHGB6Q9Y5F9 930 aa10.14□□□□□ -0.79
SEC13-214ENST00000476597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
SEC13-214ENST00000476597 LRBAP50851 2863 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 IGKV3D-11A0A0A0MRZ8 115 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 TCRBV16S1A1N1A0A5B0 115 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 LRIT2A6NDA9 550 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 FAM227AF5H4B4 570 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 CDK2AP1O14519 115 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 MAN1A2O60476 641 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 PRAMEF4O60810 478 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 STK16O75716 305 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 RASAL1O95294 804 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 CLDN1O95832 211 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 TBX6O95947 436 aaPredicted RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 CRYABP02511 175 aaKnown RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 RNH1P13489 461 aaKnown RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 GSTM2P28161 218 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 SLC26A5P58743 744 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 RAB10P61026 200 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 STXBP1P61764 594 aaKnown RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 BTN3A2P78410 334 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 GUCY2DQ02846 1103 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 TUBA3CQ13748 450 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 RUNX2Q13950 521 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 OR4D1Q15615 310 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 KBTBD12Q3ZCT8 623 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 ZNF766Q5HY98 468 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 PRAMEF9Q5VWM5 478 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 SULT1C3Q6IMI6 304 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 TUBA3EQ6PEY2 450 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 MAMDC2Q7Z304 686 aaPredicted RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 CRLF3Q8IUI8 442 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 CTAGE3PQ8IX95 158 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 LGI4Q8N135 537 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 KRT78Q8N1N4 520 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 CA13Q8N1Q1 262 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 NFAM1Q8NET5 270 aaPredicted RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 KIAA1191Q96A73 305 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 ESAMQ96AP7 390 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 MS4A6EQ96DS6 147 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 RAB17Q9H0T7 212 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 CNOT10Q9H9A5 744 aaKnown RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 NECTIN3Q9NQS3 549 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 PRDM9Q9NQV7 894 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 DNAJC11Q9NVH1 559 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 PTBP2Q9UKA9 531 aaKnown RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 ZNF490Q9ULM2 529 aaPredicted RBP10.13□□□□□ -0.79
SEC13-214ENST00000476597 NUP210LQ5VU65 1888 aa10.13□□□□□ -0.79
SEC13-214ENST00000476597 A0A1B0GUH1 482 aa10.12□□□□□ -0.79
SEC13-214ENST00000476597 PSMD12O00232 456 aaPredicted RBP10.12□□□□□ -0.79
SEC13-214ENST00000476597 CLGNO14967 610 aa10.12□□□□□ -0.79
SEC13-214ENST00000476597 CLEC3AO75596 197 aa10.12□□□□□ -0.79
SEC13-214ENST00000476597 FAM155BO75949 473 aa10.12□□□□□ -0.79
SEC13-214ENST00000476597 MST1P26927 711 aa10.12□□□□□ -0.79
SEC13-214ENST00000476597 HNRNPH1P31943 449 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms