RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MTERF3Q96E29 417 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 THOC1Q96FV9 657 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TCTN2Q96GX1 697 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 AHCYL2Q96HN2 611 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 PRAP1Q96NZ9 151 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CDK15Q96Q40 435 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 OR52B2Q96RD2 323 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 EBF4Q9BQW3 602 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 BTBD10Q9BSF8 475 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 BRINP2Q9C0B6 783 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SEMA4CQ9C0C4 833 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 NMUR2Q9GZQ4 415 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ABCG4Q9H172 646 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TUBB1Q9H4B7 451 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 THSD1Q9NS62 852 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 GID8Q9NWU2 228 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 GEMIN8Q9NWZ8 242 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ACTR10Q9NZ32 417 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SCHIP1Q9P0W5 487 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TAC3Q9UHF0 121 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ICKQ9UPZ9 632 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 AP1M2Q9Y6Q5 423 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ANKRD36A6QL64 1941 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 DOCK9Q9BZ29 2069 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TRPM6Q9BX84 2022 aa6.71□□□□□ -1.33
SHQ1-207ENST00000475558 A0A1W2PPV9 198 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ARHGAP10A1A4S6 786 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 FAM234BA2RU67 622 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 OR6C74A6NCV1 312 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 TMEM233B4DJY2 109 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 E7EQ34 232 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 E9PBE3 544 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 K7ENP7 123 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 LSM1O15116 133 aaKnown RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 GYG2O15488 501 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 CFLARO15519 480 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SIAH2O43255 324 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 OR1F1O43749 312 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SLC28A2O43868 658 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 KLHL41O60662 606 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SDC3O75056 442 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SKAP2O75563 359 aaPredicted RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 GP1BAP07359 652 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 PCNAP12004 261 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 CKMT1AP12532 417 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 COX4I1P13073 169 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 RBMS1P29558 406 aaKnown RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 CCR10P46092 362 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 HNRNPFP52597 415 aaKnown RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 FOXA1P55317 472 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 CLDN8P56748 225 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 KCNK10P57789 538 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 C21orf58P58505 322 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 CSNK1G2P78368 415 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 REEP5Q00765 189 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 GUCA2AQ02747 115 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 BIKQ13323 160 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 C1orf61Q13536 156 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 FASTKQ14296 549 aaKnown RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 GPR18Q14330 331 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 NR1D2Q14995 579 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 KIAA0040Q15053 153 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 NR0B2Q15466 257 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 MMEL1Q495T6 779 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ZNF542PQ5EBM4 170 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SGO1Q5FBB7 561 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 FBXO48Q5FWF7 155 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 TCTE1Q5JU00 501 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 TMTC4Q5T4D3 741 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 C6orf163Q5TEZ5 329 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 VWA5B1Q5TIE3 1220 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ANXA8L1Q5VT79 327 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 IL23RQ5VWK5 629 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ZNF425Q6IV72 752 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 PRMT9Q6P2P2 845 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 INO80CQ6PI98 192 aaPredicted RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 FIGLAQ6QHK4 219 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 WDR74Q6RFH5 385 aaPredicted RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 IGF2-ASQ6U949 168 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 C16orf89Q6UX73 402 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 HACD2Q6Y1H2 254 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ATG14Q6ZNE5 492 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 MSANTD1Q6ZTZ1 278 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 IKBIPQ70UQ0 350 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 RPS27LQ71UM5 84 aaKnown RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 MAVSQ7Z434 540 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SAMD14Q8IZD0 417 aaPredicted RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 SLC25A45Q8N413 288 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 LINC01555Q8NAE3 123 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 KYQ8NBH2 561 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 MFSD9Q8NBP5 474 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 PPFIBP2Q8ND30 876 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 HUS1BQ8NHY5 278 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 RSC1A1Q92681 617 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 RERGQ96A58 199 aaPredicted RBP6.71□□□□□ -1.34
SHQ1-207ENST00000475558 ROPN1LQ96C74 230 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 KLHL29Q96CT2 875 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 MOCOSQ96EN8 888 aa6.71□□□□□ -1.34
SHQ1-207ENST00000475558 TBCDQ9BTW9 1192 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms