RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 C9orf62Q8N4C0 152 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 UBTD2Q8WUN7 234 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 C17orf62Q9BQA9 187 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 EBPLQ9BY08 206 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 RBFOX1Q9NWB1 397 aaKnown RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 FZD4Q9ULV1 537 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 PCDHGC4Q9Y5F7 938 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 DRGXA6NNA5 263 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 INSIG1O15503 277 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 PROM1O43490 865 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 TNFRSF21O75509 655 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 B3GAT3O94766 335 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 IGHA2P01877 340 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 MSL3P1P0C860 447 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SRCP12931 536 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 RPS3P23396 243 aaKnown RBP eCLIP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 HOXD9P28356 352 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC9A3P48764 834 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 MAN2A2P49641 1150 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 RRAS2P62070 204 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 MAB21L1Q13394 359 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 DDI2Q5TDH0 399 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 TRIM69Q86WT6 500 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC34A3Q8N130 599 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 STK40Q8N2I9 435 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 ZBED6CLQ96FA7 236 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 DCLRE1CQ96SD1 692 aaKnown RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 RACGAP1Q9H0H5 632 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 CHST8Q9H2A9 424 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SH3BP4Q9P0V3 963 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 NLKQ9UBE8 527 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 SSR3Q9UNL2 185 aa17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 DNMT3AQ9Y6K1 912 aaPredicted RBP17.89■□□□□ 0.45
ECHDC1-214ENST00000474289 ARL5CA6NH57 179 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 MYL12BO14950 172 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 YY2O15391 372 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 TPST2O60704 377 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 DDNO94850 711 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 AP2A2O94973 939 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ARHGEF15O94989 841 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 LGI1O95970 557 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 HMBSP08397 361 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 HBQ1P09105 142 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 PIPP12273 146 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 MYL12AP19105 171 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 CNR2P34972 360 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 RGS4P49798 205 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 SELENOWP63302 87 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 HKDC1Q2TB90 917 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 LIPKQ5VXJ0 399 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 MIB1Q86YT6 1006 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 SPATA2LQ8IUW3 424 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ZC3HAV1LQ96H79 300 aaKnown RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 PSKH2Q96QS6 385 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 GFM1Q96RP9 751 aaKnown RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ELOVL6Q9H5J4 265 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ABI2Q9NYB9 513 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 LINC00862A6NCI5 91 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 TRIM77I1YAP6 450 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ENTPD6O75354 484 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 STK16O75716 305 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 TSPAN9O75954 239 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 FAM157BP0CG42 384 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 MAPK1P28482 360 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 DGKEP52429 567 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 ARHGEF7Q14155 803 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 DUSP18Q8NEJ0 188 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 DNAJA4Q8WW22 397 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 KIAA1143Q96AT1 154 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 CMTM7Q96FZ5 175 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 TMEM80Q96HE8 168 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 IL4I1Q96RQ9 567 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 FAM129BQ96TA1 746 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 TINF2Q9BSI4 451 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 SPATA9Q9BWV2 254 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 PCDHB11Q9Y5F2 797 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 PCDHB1Q9Y5F3 818 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 RAI2Q9Y5P3 530 aa17.88■□□□□ 0.45
ECHDC1-214ENST00000474289 PIKFYVEQ9Y2I7 2098 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 GREB1Q4ZG55 1949 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 SMIM30A4D0T7 59 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 J3KTA2 159 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC22A5O76082 557 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 IL1AP01583 271 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 ARSBP15848 533 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 PRPS1L1P21108 318 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 PTX3P26022 381 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 APEX1P27695 318 aaKnown RBP17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 MON1AQ86VX9 555 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 OR7D4Q8NG98 312 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 HYLS1Q96M11 299 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 QRFPRQ96P65 431 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 ZSCAN5AQ9BUG6 496 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 BOCQ9BWV1 1114 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 POLR2J2Q9GZM3 115 aaKnown RBP17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC25A19Q9HC21 320 aa17.87■□□□□ 0.45
ECHDC1-214ENST00000474289 PAK6Q9NQU5 681 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms