RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GFOD2Q3B7J2 385 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TRIM60Q495X7 471 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 XKR3Q5GH77 459 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GLRA4Q5JXX5 417 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 LRRC38Q5VT99 294 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM171A1Q5VUB5 890 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 IL31Q6EBC2 164 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CNSTQ6PJW8 725 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 C17orf107Q6ZR85 190 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 HSD17B13Q7Z5P4 300 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM160B2Q86V87 743 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 COMTD1Q86VU5 262 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 HIPK1Q86Z02 1210 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 IGDCC3Q8IVU1 814 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FAM71AQ8IYT1 594 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ADGRF4Q8IZF3 695 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ANKRD52Q8NB46 1076 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 AVL9Q8NBF6 648 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SETD9Q8NE22 299 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CCDC17Q96LX7 622 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 NECTIN4Q96NY8 510 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 HOPXQ9BPY8 73 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TREX2Q9BQ50 279 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ITPAQ9BY32 194 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GPR61Q9BZJ8 451 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MS4A7Q9GZW8 240 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 AP5M1Q9H0R1 490 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZBTB20Q9HC78 741 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF334Q9HCZ1 680 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CHMP1AQ9HD42 196 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 IL1RAPQ9NPH3 570 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PRMT8Q9NR22 394 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CHRAC1Q9NRG0 131 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GKN1Q9NS71 199 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 BARHL2Q9NY43 387 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TREM2Q9NZC2 230 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GDE1Q9NZC3 331 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 USP36Q9P275 1121 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF624Q9P2J8 865 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 BAZ2AQ9UIF9 1905 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MSRAQ9UJ68 235 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ALG5Q9Y673 324 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ASTN1O14525 1302 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 A0A1W2PQ09 198 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 OR2A25A4D2G3 310 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 BBIP1A8MTZ0 92 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PTGES3LE9PB15 166 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ACOT7O00154 380 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MRASO14807 208 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PHYHO14832 338 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SCAMP1O15126 338 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TPST1O60507 370 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC43A1O75387 559 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 WDR47O94967 919 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PRSS23O95084 383 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FGF2P09038 288 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 UQCRFS1P1P0C7P4 283 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 APEHP13798 732 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 HNRNPLP14866 589 aaKnown RBP eCLIP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CD1EP15812 388 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZNF8P17098 575 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CD72P21854 359 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PTBP1P26599 531 aaKnown RBP eCLIP4.94□□□□□ -1.624e-9■■□□□ 12.6
TMEM39A-206ENST00000473684 LAP3P28838 519 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RPL22P35268 128 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 LIPAP38571 399 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ETV5P41161 510 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CYP2J2P51589 502 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC7A2P52569 658 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ISL1P61371 349 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLC35A2P78381 396 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PIGFQ07326 219 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PRKAA1Q13131 559 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RPA4Q13156 261 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 GPR17Q13304 367 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 MAPKAPK3Q16644 382 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CTU2Q2VPK5 515 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 KRBOX4Q5JUW0 171 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 THEM4Q5T1C6 240 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CYS1Q717R9 158 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 PGAP1Q75T13 922 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ZDHHC17Q8IUH5 632 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DNAJC5GQ8N7S2 189 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TEX19Q8NA77 164 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 DMBX1Q8NFW5 382 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ITFG1Q8TB96 612 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SLITRK1Q96PX8 696 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RBP7Q96R05 134 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 SSX3Q99909 188 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 NTMT1Q9BV86 223 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 BBS2Q9BXC9 721 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 CPEB1Q9BZB8 566 aaKnown RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 OPA3Q9H6K4 179 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 WDR55Q9H6Y2 383 aaPredicted RBP4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 TNFRSF12AQ9NP84 129 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 ACOT13Q9NPJ3 140 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 RNF6Q9Y252 685 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 KCPQ6ZWJ8 1503 aa4.94□□□□□ -1.62
TMEM39A-206ENST00000473684 FRMPD2Q68DX3 1309 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms