RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MYBL2P10244 700 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 GABRB3P28472 473 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CHRNB4P30926 498 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 HSD17B2P37059 387 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 SLC1A2P43004 574 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 NPY2RP49146 381 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 BASP1P80723 227 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 KIF5AQ12840 1032 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 NAE1Q13564 534 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 TRIP13Q15645 432 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CEBPEQ15744 281 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 GXYLT1Q4G148 440 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CATSPEREQ5SY80 951 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 ZNF470Q6ECI4 717 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CAPN13Q6MZZ7 669 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 MRNIPQ6NTE8 343 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 AGTRAPQ6RW13 159 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 UBE2R2Q712K3 238 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 KRTAP1-3Q8IUG1 177 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 RNF10Q8N5U6 811 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 UBL4BQ8N7F7 174 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 ZNF321PQ8N8H1 164 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 ANKRD53Q8N9V6 530 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 OR4K1Q8NGD4 311 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 UTP15Q8TED0 518 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 EEF1AKMT1Q8WVE0 214 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 SLCO2A1Q92959 643 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 ALKBH8Q96BT7 664 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 TBC1D20Q96BZ9 403 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 SMIM10Q96HG1 83 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 PWWP2AQ96N64 755 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 PTCHD1Q96NR3 888 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 OR1F2PQ96R84 312 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 TCF12Q99081 682 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 NDNQ99608 321 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 FOXC2Q99958 501 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 ZNF559Q9BR84 538 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 GPATCH1Q9BRR8 931 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CNPPD1Q9BV87 410 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 SEMA4BQ9NPR2 832 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 LZTFL1Q9NQ48 299 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 CCDC177Q9NQR7 707 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 COQ3Q9NZJ6 369 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 KCMF1Q9P0J7 381 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 Q9UFV3 132 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 DRG1Q9Y295 367 aaKnown RBP8.96□□□□□ -0.98
MCF2L-223ENST00000473345 VPS9D1Q9Y2B5 631 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 PLEKHA6Q9Y2H5 1048 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 NAV3Q8IVL0 2385 aa8.96□□□□□ -0.98
MCF2L-223ENST00000473345 VPS13CQ709C8 3753 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 TRBV11-1A0A0K0K1C0 115 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 FAM221AA4D161 298 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 E5RI56 91 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 NPIPA2E9PIF3 369 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 NPIPA3F8WFD2 350 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 H3BMM5 538 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 NDUFS4O43181 175 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 CEP104O60308 925 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 OR6B1O95007 311 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 TBX6O95947 436 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ALOX12P18054 663 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ENDOUP21128 410 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 CDKN2DP55273 166 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 RAB8AP61006 207 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ADAM8P78325 824 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 RUNX2Q13950 521 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 RBM20Q5T481 1227 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 RNF187Q5TA31 235 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 MEI1Q5TIA1 1274 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 UGT3A1Q6NUS8 523 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 SEM1Q6ZVN7 128 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 KIAA1328Q86T90 577 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ZZZ3Q8IYH5 903 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 CCDC89Q8N998 374 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 FAM98AQ8NCA5 519 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 CAMKVQ8NCB2 501 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ABHD11Q8NFV4 315 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 RND1Q92730 232 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 KCNJ9Q92806 393 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 THAP11Q96EK4 314 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 EBNA1BP2Q99848 306 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 AARSD1Q9BTE6 412 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 SARGQ9BW04 601 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ZDHHC11Q9H8X9 412 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 PLAC1Q9HBJ0 212 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 BFARQ9NZS9 450 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ZFATQ9P243 1243 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 SLC17A6Q9P2U8 582 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 KCNN3Q9UGI6 736 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 ST6GALNAC2Q9UJ37 374 aa8.95□□□□□ -0.98
MCF2L-223ENST00000473345 INTS1Q8N201 2190 aaKnown RBP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 NIPBLQ6KC79 2804 aaeCLIP8.95□□□□□ -0.98
MCF2L-223ENST00000473345 A0A0G2JN53 185 aa8.94□□□□□ -0.98
MCF2L-223ENST00000473345 OR1F1O43749 312 aa8.94□□□□□ -0.98
MCF2L-223ENST00000473345 ITGA10O75578 1167 aa8.94□□□□□ -0.98
MCF2L-223ENST00000473345 GLSO94925 669 aaPredicted RBP8.94□□□□□ -0.98
MCF2L-223ENST00000473345 MLYCDO95822 493 aa8.94□□□□□ -0.98
MCF2L-223ENST00000473345 TPSB2P20231 275 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms