RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZC3H7AQ8IWR0 971 aaKnown RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 LAS2Q8IYD9 372 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 ARFGAP2Q8N6H7 521 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 OR2Y1Q8NGV0 311 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 STT3BQ8TCJ2 826 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 ZNF483Q8TF39 744 aaPredicted RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 FKBP10Q96AY3 582 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 MVB12AQ96EY5 273 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 PTCD3Q96EY7 689 aaKnown RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 TMEM237Q96Q45 408 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 C1QTNF3Q9BXJ4 246 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 CAPS2Q9BXY5 557 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 NOL11Q9H8H0 719 aaKnown RBP12.42□□□□□ -0.42
TPM3-216ENST00000473036 MKS1Q9NXB0 559 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 MID2Q9UJV3 735 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 RNF11Q9Y3C5 154 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 NAALAD2Q9Y3Q0 740 aa12.42□□□□□ -0.42
TPM3-216ENST00000473036 LRIT2A6NDA9 550 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 C9J4A7 227 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 TXNDC9O14530 226 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 COPEO14579 308 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 PLIN3O60664 434 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 GALR3O60755 368 aaPredicted RBP12.41□□□□□ -0.42
TPM3-216ENST00000473036 SMIM24O75264 130 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 GLRA3O75311 464 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 RDH16O75452 317 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 SASH3O75995 380 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 KLHL18O94889 574 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 ALBP02768 609 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 SERPINA6P08185 405 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 EPB42P16452 691 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 FBLP22087 321 aaKnown RBP12.41□□□□□ -0.42
TPM3-216ENST00000473036 CASRP41180 1078 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 RAB8AP61006 207 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 OLR1P78380 273 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 FOXK1P85037 733 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 TRAF3Q13114 568 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 ADPRMQ3LIE5 342 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 CCDC153Q494R4 210 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 SRRM1Q8IYB3 904 aaKnown RBP12.41□□□□□ -0.42
TPM3-216ENST00000473036 L3MBTL4Q8NA19 623 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 ZNF473Q8WTR7 871 aaKnown RBP12.41□□□□□ -0.42
TPM3-216ENST00000473036 SREK1Q8WXA9 508 aaKnown RBP12.41□□□□□ -0.42
TPM3-216ENST00000473036 MS4A6EQ96DS6 147 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 IPPKQ9H8X2 491 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 WDR54Q9H977 334 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 HCN3Q9P1Z3 774 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 TMCO1Q9UM00 188 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 KCNMB2Q9Y691 235 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 SLC22A7Q9Y694 548 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
TPM3-216ENST00000473036 TNRC6AQ8NDV7 1962 aaKnown RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 A0A0G2JN53 185 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 H0YIG0 161 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 SOCS6O14544 535 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 TM9SF1O15321 606 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 PRPF4O43172 522 aaKnown RBP eCLIP12.4□□□□□ -0.42
TPM3-216ENST00000473036 H2AFYO75367 372 aaKnown RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 CLEC3AO75596 197 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 DNAJB5O75953 348 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 BMP10O95393 424 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 ETHE1O95571 254 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 SLC35G6P0C7Q6 338 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 ALOX12P18054 663 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 OTX2P32243 289 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 PIK3CGP48736 1102 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 PRKAA2P54646 552 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 KLC1Q07866 573 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 CHAF1BQ13112 559 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 KCNAB2Q13303 367 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 ATP1A4Q13733 1029 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 DEFB134Q4QY38 66 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 TOR1AIP1Q5JTV8 583 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 ZNF678Q5SXM1 525 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 METTL2BQ6P1Q9 378 aaKnown RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 PRSS58Q8IYP2 241 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 BANPQ8N9N5 519 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 TRPV3Q8NET8 790 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 WDR20Q8TBZ3 569 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 TLCD1Q96CP7 247 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 QRFPRQ96P65 431 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 F2RL3Q96RI0 385 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 EFCAB11Q9BUY7 163 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 TGIF2Q9GZN2 237 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 SEMA4BQ9NPR2 832 aaPredicted RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
TPM3-216ENST00000473036 GPN3Q9UHW5 284 aaPredicted RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 TNPO3Q9Y5L0 923 aaKnown RBP12.4□□□□□ -0.42
TPM3-216ENST00000473036 SH3BGRLO75368 114 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 SPAG7O75391 227 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ZWINTO95229 277 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 ATP5F1P24539 256 aaPredicted RBP12.39□□□□□ -0.43
TPM3-216ENST00000473036 CXCR2P25025 360 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 FOLR3P41439 243 aa12.39□□□□□ -0.43
TPM3-216ENST00000473036 CCR10P46092 362 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms