RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 CTNNA3Q9UI47 895 aa4.47□□□□□ -1.69
GCFC2-205ENST00000470197 SPIN1Q9Y657 262 aaPredicted RBP4.47□□□□□ -1.69
GCFC2-205ENST00000470197 LAMB2P55268 1798 aa4.47□□□□□ -1.69
GCFC2-205ENST00000470197 MAGEB3O15480 346 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 GMNNO75496 209 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 PAICSP22234 425 aaKnown RBP4.46□□□□□ -1.69
GCFC2-205ENST00000470197 CCR1P32246 355 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 ARHGAP1Q07960 439 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 RIPK1Q13546 671 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 CUL3Q13618 768 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 C9orf50Q5SZB4 431 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 C1QL4Q86Z23 238 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 SPATA22Q8NHS9 363 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 INPP5DQ92835 1189 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 PSKH2Q96QS6 385 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 ACKR4Q9NPB9 350 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 RDH8Q9NYR8 311 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 TLK1Q9UKI8 766 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 SNX6Q9UNH7 406 aa4.46□□□□□ -1.69
GCFC2-205ENST00000470197 PHLPP2Q6ZVD8 1323 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 TMEM129A0AVI4 362 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 SPINT2O43291 252 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 CCND2P30279 289 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PRDX2P32119 198 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PEX19P40855 299 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 CACNA2D1P54289 1103 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 FAM174BQ3ZCQ3 159 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 XKR3Q5GH77 459 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 CCNYL2Q5T2Q4 361 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 LIPKQ5VXJ0 399 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 Q6ZPA2 131 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 TMEM139Q8IV31 216 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 GBGT1Q8N5D6 347 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 GCSAMQ8N6F7 178 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 RNF148Q8N7C7 305 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 SMRP1Q8NCR6 262 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 OR10Q1Q8NGQ4 319 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 RBM28Q9NW13 759 aaKnown RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 C1RLQ9NZP8 487 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 CLEC4AQ9UMR7 237 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PFASO15067 1338 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PROS1P07225 676 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 ENO3P13929 434 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 EPCAMP16422 314 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 ARF4P18085 180 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 EEF1B2P24534 225 aaKnown RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PKLRP30613 574 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 SRD5A2P31213 254 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PDZK1IP1Q13113 114 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 ZC3H3Q8IXZ2 948 aaKnown RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 DSELQ8IZU8 1212 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 ZNF444Q8N0Y2 327 aaPredicted RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 FAM20AQ96MK3 541 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 PRMT1Q99873 361 aaKnown RBP4.46□□□□□ -1.7
GCFC2-205ENST00000470197 ZNF416Q9BWM5 594 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 MFHAS1Q9Y4C4 1052 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 U3KQV3 271 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 A0A0C4DFX4 3053 aa4.46□□□□□ -1.7
GCFC2-205ENST00000470197 hDV102S1A0JD36 115 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 ARHGAP42A6NI28 874 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 ANGPT2O15123 496 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 ESRRBO95718 433 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 TMOD1P28289 359 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SSTR2P30874 369 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 FOXM1Q08050 763 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 CDH18Q13634 790 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 KRT31Q15323 416 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 NPTX1Q15818 432 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 C6orf10Q5SRN2 563 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 TMEM179Q6ZVK1 233 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 BNIPLQ7Z465 357 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SLC24A4Q8NFF2 622 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SDR42E1Q8WUS8 393 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 ARRDC1-AS1Q9H2J1 176 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 UBQLN3Q9H347 655 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 CHMP4BQ9H444 224 aaKnown RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SLC28A1O00337 649 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 AKAP8O43823 692 aaKnown RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 TSPAN1O60635 241 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 LDB3O75112 727 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SLC25A27O95847 323 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 IGHEP01854 428 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 F3P13726 295 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 ELAVL4P26378 380 aaKnown RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 MARCKSP29966 332 aaPredicted RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 PPP1R8Q12972 351 aaKnown RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 UGT3A2Q3SY77 523 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 C1orf185Q5T7R7 199 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 OGFOD2Q6N063 350 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 SLC22A9Q8IVM8 553 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 LCORLQ8N3X6 602 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 TMEM199Q8N511 208 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 DQX1Q8TE96 717 aaKnown RBP4.45□□□□□ -1.7
GCFC2-205ENST00000470197 HAS2Q92819 552 aa4.45□□□□□ -1.7
GCFC2-205ENST00000470197 OXNAD1Q96HP4 312 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms