RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 ASB1Q9Y576 335 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 ESPL1Q14674 2120 aa13.25□□□□□ -0.29
COMMD3-208ENST00000470045 IGHV3-20A0A0C4DH32 117 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CCDC189A1A4V9 331 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 KIF2AO00139 706 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 KERAO60938 352 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 SEC24DO94855 1032 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 TBX6O95947 436 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 FHP07954 510 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CD22P20273 847 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 JAK1P23458 1154 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 PHBP35232 272 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 RAB8AP61006 207 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 OLR1P78380 273 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 ZNF169Q14929 603 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 ABRAXAS2Q15018 415 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 TLR1Q15399 786 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 PDK4Q16654 411 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 ADPRMQ3LIE5 342 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 GLE1Q53GS7 698 aaKnown RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 FBXO48Q5FWF7 155 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 TOR1AIP1Q5JTV8 583 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 RAPH1Q70E73 1250 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 LRRC70Q7Z2Q7 622 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 VN1R5Q7Z5H4 357 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 TBC1D1Q86TI0 1168 aaPredicted RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 FAM26EQ8N5C1 309 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CISD2Q8N5K1 135 aaKnown RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 SIRT6Q8N6T7 355 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 AMER2Q8N7J2 671 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 RBCK1Q9BYM8 510 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CD244Q9BZW8 370 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 RNF32Q9H0A6 362 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CDC42EP4Q9H3Q1 356 aaKnown RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 KLHL31Q9H511 634 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 PTGFRNQ9P2B2 879 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
COMMD3-208ENST00000470045 HIVEP3Q5T1R4 2406 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 COL12A1Q99715 3063 aa13.24□□□□□ -0.29
COMMD3-208ENST00000470045 CLGNO14967 610 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 H2AFYO75367 372 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 CLEC3AO75596 197 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 CDC123O75794 336 aaPredicted RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 S100BP04271 92 aaPredicted RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 CTAGE8P0CG41 777 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 MTHFD2P13995 350 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 CASP2P42575 452 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 NSDHLQ15738 373 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 TBCCQ15814 346 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 MROH9Q5TGP6 573 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 H3F3CQ6NXT2 135 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 RPUSD3Q6P087 351 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 CTAGE4Q8IX94 777 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 KRT78Q8N1N4 520 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 RHEBL1Q8TAI7 183 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 KCTD4Q8WVF5 259 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 HAS2Q92819 552 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 TSLPQ969D9 159 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 NXNL1Q96CM4 212 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 MS4A6EQ96DS6 147 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 PTCD3Q96EY7 689 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 FMO2Q99518 471 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 EFCAB11Q9BUY7 163 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 RHBGQ9H310 441 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 SNX15Q9NRS6 342 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 ACOT9Q9Y305 439 aa13.23□□□□□ -0.29
COMMD3-208ENST00000470045 COPG1Q9Y678 874 aaKnown RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 USP9YO00507 2555 aaPredicted RBP13.23□□□□□ -0.29
COMMD3-208ENST00000470045 A0A087X1B8 175 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 LRIT2A6NDA9 550 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 UBXN8O00124 270 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 WFS1O76024 890 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 CBX6O95503 412 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 C2P06681 752 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 RNH1P13489 461 aaKnown RBP13.22□□□□□ -0.29
COMMD3-208ENST00000470045 HNF4AP41235 474 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 TNFSF10P50591 281 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 IRF9Q00978 393 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 MRPL49Q13405 166 aaKnown RBP13.22□□□□□ -0.29
COMMD3-208ENST00000470045 DOC2AQ14183 400 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 EXT1Q16394 746 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 BTBD16Q32M84 506 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 SFT2D3Q587I9 215 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 PAPD4Q6PIY7 484 aaKnown RBP13.22□□□□□ -0.29
COMMD3-208ENST00000470045 CA13Q8N1Q1 262 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 SNX31Q8N9S9 440 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 CATSPER1Q8NEC5 780 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 M1APQ8TC57 530 aa13.22□□□□□ -0.29
COMMD3-208ENST00000470045 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms