RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 ATG2BQ96BY7 2078 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 HEATR5BQ9P2D3 2071 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 HEPACAM2A8MVW5 462 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 FOXE1O00358 373 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 ZNF197O14709 1029 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 PCDHGA12O60330 932 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 PFDN1O60925 122 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 TNFRSF21O75509 655 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 WBP4O75554 376 aaKnown RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 MT-ND2P03891 347 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 JUNDP17535 347 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 KRT20P35900 424 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 RPP38P78345 283 aaKnown RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 NPRL3Q12980 569 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 ZNF829Q3KNS6 432 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 DUS1LQ6P1R4 473 aaKnown RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 RNF130Q86XS8 419 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 MMAAQ8IVH4 418 aaKnown RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 DRAXINQ8NBI3 349 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 APH1BQ8WW43 257 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 TAMM41Q96BW9 452 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 EFCAB11Q9BUY7 163 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 SPATA9Q9BWV2 254 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 ZCCHC2Q9C0B9 1178 aaKnown RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 CCDC177Q9NQR7 707 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-205ENST00000469687 RLIMQ9NVW2 624 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 SPASTQ9UBP0 616 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 CORO2BQ9UQ03 480 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 ASF1AQ9Y294 204 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 MAP4K5Q9Y4K4 846 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 LYVE1Q9Y5Y7 322 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 GMEB1Q9Y692 573 aa14.07□□□□□ -0.16
CBWD3-205ENST00000469687 DENND4AQ7Z401 1863 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 FADS2O95864 444 aaKnown RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PPIBP23284 216 aaKnown RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ALDH4A1P30038 563 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 LSM3P62310 102 aaKnown RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 SELENOWP63302 87 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 FOXD4Q12950 439 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 DGCR6Q14129 220 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ZNF234Q14588 700 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 SLC5A12Q1EHB4 618 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 FAM71E1Q6IPT2 247 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 GPR153Q6NV75 609 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TMC5Q6UXY8 1006 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 CROCCP3Q8IVE0 287 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 SLC15A4Q8N697 577 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ZNF540Q8NDQ6 660 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 GOT1L1Q8NHS2 421 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PPCDCQ96CD2 204 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 KCNC2Q96PR1 638 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 APOL4Q9BPW4 351 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 RAD21L1Q9H4I0 556 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TM7SF3Q9NS93 570 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 SLC23A2Q9UGH3 650 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PADI2Q9Y2J8 665 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 LINC01553A4QN01 128 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 SOBPA7XYQ1 873 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 J3KTA2 159 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 CLPXO76031 633 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TBX6O95947 436 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 VIPP01282 170 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 IL3P08700 152 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ELP6Q0PNE2 266 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PDE7AQ13946 482 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ELAVL3Q14576 367 aaKnown RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PAGE2BQ5JRK9 111 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TSPYL5Q86VY4 417 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ANKRD13BQ86YJ7 626 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 ENTHD1Q8IYW4 607 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TMIEQ8NEW7 156 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 EPYCQ99645 322 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 OR52A5Q9H2C5 316 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 TDRKHQ9Y2W6 561 aaKnown RBP14.06□□□□□ -0.16
CBWD3-205ENST00000469687 PCDHGB1Q9Y5G3 927 aa14.06□□□□□ -0.16
CBWD3-205ENST00000469687 EDDM13A0A1B0GTR0 161 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 RTCAO00442 366 aaKnown RBP14.05□□□□□ -0.16
CBWD3-205ENST00000469687 GPR37L1O60883 481 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 FAM20BO75063 409 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 ACVR2AP27037 513 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 C21orf59P57076 290 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 SCARB2Q14108 478 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 TEAD4Q15561 434 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 MOGQ16653 247 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 FAM78AQ5JUQ0 283 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 PRAMEF14Q5SWL7 426 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 GCNT6Q5T4J0 391 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 PRAMEF13Q5VWM6 474 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 METTL4Q8N3J2 472 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 SMYD1Q8NB12 490 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 OR52N2Q8NGI0 321 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 MIPOL1Q8TD10 442 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 RORBQ92753 470 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 BORCS5Q969J3 196 aa14.05□□□□□ -0.16
CBWD3-205ENST00000469687 CXorf40BQ96DE9 158 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms