RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ANXA6P08133 673 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ANXA5P08758 320 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SBK3P0C264 359 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC35G4P0C7Q5 338 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR89BP0CG08 455 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 KITP10721 976 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 MYF5P13349 255 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ENO3P13929 434 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF20P17024 532 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 HK1P19367 917 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CD9P21926 228 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ATP5F1P24539 256 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 EEF1DP29692 281 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ARL1P40616 181 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC26A3P40879 764 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 HALP42357 657 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GDF5P43026 501 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CCR10P46092 362 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 HSPA7P48741 367 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 AGTR2P50052 363 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CSRP3P50461 194 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 BLKP51451 505 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 NAGLUP54802 743 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CDH13P55290 713 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 NXPH1P58417 271 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 RAP2BP61225 183 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PLOD1Q02809 727 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 STX3Q13277 289 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CLCA4Q14CN2 919 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PCLAFQ15004 111 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 RPE65Q16518 533 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 RBBP7Q16576 425 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PHKG1Q16816 387 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 DUOXA1Q1HG43 343 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 DEFB133Q30KQ1 61 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF528Q3MIS6 628 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TECRLQ5HYJ1 363 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 METRNLQ641Q3 311 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ATG16L1Q676U5 607 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ZYG11AQ6WRX3 759 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 Q6ZRM9 215 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 FAM47EQ6ZV65 393 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CCDC91Q7Z6B0 441 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 IQCHQ86VS3 1027 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PARGQ86W56 976 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GKN2Q86XP6 184 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 NRROSQ86YC3 692 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GATAD2AQ86YP4 633 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SYT12Q8IV01 421 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SFTPA2Q8IWL1 248 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 LRRC34Q8IZ02 419 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC22A15Q8IZD6 547 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CNPY4Q8N129 248 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TEX9Q8N6V9 391 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 DCBLD1Q8N8Z6 715 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SNX31Q8N9S9 440 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PPFIBP2Q8ND30 876 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 OR5AR1Q8NGP9 310 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 AGR3Q8TD06 166 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TRPC4APQ8TEL6 797 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CKAP2Q8WWK9 683 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PATE1Q8WXA2 126 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ATOH1Q92858 354 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ATP6V1E2Q96A05 226 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SH3KBP1Q96B97 665 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CXorf40BQ96DE9 158 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 THOC1Q96FV9 657 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 MED8Q96G25 268 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PDLIM5Q96HC4 596 aaKnown RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 LINC00615Q96LM1 132 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 RMDN2Q96LZ7 410 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 MAGEB18Q96M61 343 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 IL17FQ96PD4 163 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 DMRTA2Q96SC8 542 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ATOH8Q96SQ7 321 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PKP4Q99569 1192 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 NRTNQ99748 197 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TIMM29Q9BSF4 260 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 LRFN3Q9BTN0 628 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 HGH1Q9BTY7 390 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GATA5Q9BWX5 397 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR87Q9BY21 358 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GSDMCQ9BYG8 508 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 OR52A5Q9H2C5 316 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 XKR8Q9H6D3 395 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PARVBQ9HBI1 364 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 AURKAIP1Q9NWT8 199 aaPredicted RBP3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 WWOXQ9NZC7 414 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 NUDT4Q9NZJ9 180 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 FAM30AQ9NZY2 134 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TAAR2Q9P1P5 351 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 COPG2Q9UBF2 871 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 SPASTQ9UBP0 616 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 TBC1D29Q9UFV1 150 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 MID2Q9UJV3 735 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 GMEB2Q9UKD1 530 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 PILRBQ9UKJ0 227 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 ADAM21Q9UKJ8 722 aa3.94□□□□□ -1.78
TMEM39A-204ENST00000468545 CDYLQ9Y232 598 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms