RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CHORDC1Q9UHD1 332 aaPredicted RBP2.92□□□□□ -1.94
XRN1-206ENST00000467077 NRBP1Q9UHY1 535 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MUTYHQ9UIF7 546 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 DAPK2Q9UIK4 370 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 GRID1Q9ULK0 1009 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MROH5Q6ZUA9 1318 aa2.92□□□□□ -1.94
XRN1-206ENST00000467077 MYH1P12882 1939 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 MYH8P13535 1937 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 COL11A1P12107 1806 aaPredicted RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 ZNF236Q9UL36 1845 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 MYO5AQ9Y4I1 1855 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 KBTBD13C9JR72 458 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 SOCS3O14543 225 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 P4HA2O15460 535 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 TIMM44O43615 452 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 C22orf31O95567 290 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 CLDN1O95832 211 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 HSP90AA1P07900 732 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 KRT20P35900 424 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 STAT2P52630 851 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 HMGCS2P54868 508 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 GSDMDP57764 484 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 IRX3P78415 501 aaPredicted RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 CALD1Q05682 793 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 DRP2Q13474 957 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 SQLEQ14534 574 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 HLA-BQ31612 363 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 XKR3Q5GH77 459 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 BMP2KLQ5H9B9 411 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 SLC25A53Q5H9E4 307 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 TMEM31Q5JXX7 168 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 RNASEH2BQ5TBB1 312 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 C20orf194Q5TEA3 1177 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 GARNL3Q5VVW2 1013 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 CDC42EP5Q6NZY7 148 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 FIP1L1Q6UN15 594 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 RTN4RL2Q86UN3 420 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 MARCH9Q86YJ5 346 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 GPRC5AQ8NFJ5 357 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 OR11H4Q8NGC9 324 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 OR52N5Q8NH56 324 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 EXD1Q8NHP7 514 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 AZIN2Q96A70 460 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 DHX58Q96C10 678 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 GCNAQ96QF7 691 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 SERINC2Q96SA4 455 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 URM1Q9BTM9 101 aaKnown RBP2.91□□□□□ -1.94
XRN1-206ENST00000467077 WWTR1Q9GZV5 400 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 CPVLQ9H3G5 476 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 P4HTMQ9NXG6 502 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 SIPA1L1O43166 1804 aa2.91□□□□□ -1.94
XRN1-206ENST00000467077 A0A0G2JMZ2 1700 aa2.9□□□□□ -1.94
XRN1-206ENST00000467077 TRIOO75962 3097 aa2.9□□□□□ -1.94
XRN1-206ENST00000467077 CFAP54Q96N23 3096 aa2.9□□□□□ -1.94
XRN1-206ENST00000467077 ZNF195O14628 629 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 ZNF853P0CG23 659 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 IL11P20809 199 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 PIK3R1P27986 724 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 RBMS1P29558 406 aaKnown RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 MAZP56270 477 aaKnown RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 TWISTNBQ3B726 338 aaPredicted RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 MFSD14CQ5VZR4 134 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 GPR139Q6DWJ6 353 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 GPR142Q7Z601 462 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 PTAR1Q7Z6K3 402 aaPredicted RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 PRPF39Q86UA1 669 aaKnown RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 NUDT13Q86X67 352 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 HOGA1Q86XE5 327 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 DNAAF5Q86Y56 855 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 CDK20Q8IZL9 346 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 EID3Q8N140 333 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 MINDY1Q8N5J2 469 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 SYT2Q8N9I0 419 aaPredicted RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 APPL2Q8NEU8 664 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 SNRNP27Q8WVK2 155 aaKnown RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 SSMEM1Q8WWF3 244 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 GTF3AQ92664 365 aaKnown RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 TMCO6Q96DC7 493 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 ERP27Q96DN0 273 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 ABHD1Q96SE0 405 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 KRT12Q99456 494 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 RAD9AQ99638 391 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 KLHL4Q9C0H6 718 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 OR2B2Q9GZK3 357 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 MIS12Q9H081 205 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 WNT5BQ9H1J7 359 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 PORCNQ9H237 461 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 Q9N2K0 584 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 EQTNQ9NQ60 294 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.9□□□□□ -1.95
XRN1-206ENST00000467077 MORF4L1Q9UBU8 362 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 POMT2Q9UKY4 750 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 MAGED1Q9Y5V3 778 aaPredicted RBP2.9□□□□□ -1.95
XRN1-206ENST00000467077 FAM169AQ9Y6X4 670 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 PARP14Q460N5 1801 aa2.9□□□□□ -1.95
XRN1-206ENST00000467077 MYH15Q9Y2K3 1946 aa2.89□□□□□ -1.95
XRN1-206ENST00000467077 A0A1W2PPR1 153 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms