RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 NUMA1Q14980 2115 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 C1GALT1C1LP0DN25 315 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 PSMB5P28074 263 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 IDUAP35475 653 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 ITGA1P56199 1179 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 TAP2Q03519 686 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 HSPB3Q12988 150 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 CTF1Q16619 201 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 EXOC3L2Q2M3D2 409 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 OR9A1PQ8NGU1 263 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 C16orf78Q8WTQ4 265 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 SLC5A11Q8WWX8 675 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 DTD2Q96FN9 168 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 NIPSNAP1Q9BPW8 284 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 ABCG4Q9H172 646 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 GPN2Q9H9Y4 310 aaPredicted RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 ZNF282Q9UDV7 671 aaPredicted RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 CHD9Q3L8U1 2897 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 NOTCH4Q99466 2003 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 A0A1W2PRB8 838 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 OTOL1A6NHN0 477 aaPredicted RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 ANKDD1BA6NHY2 528 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 CD36P16671 472 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 ITIH1P19827 911 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 DMC1Q14565 340 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 FAM83HQ6ZRV2 1179 aaPredicted RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 ENTHD1Q8IYW4 607 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 TAGAPQ8N103 731 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 LGI4Q8N135 537 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 PLA2G15Q8NCC3 412 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 RAB8BQ92930 207 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 REPS1Q96D71 796 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 MAGEB10Q96LZ2 347 aaPredicted RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 COPS4Q9BT78 406 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 DMRT3Q9NQL9 472 aa15.68■□□□□ 0.1
SLX4-202ENST00000466154 FAM32AQ9Y421 112 aaKnown RBP15.68■□□□□ 0.1
SLX4-202ENST00000466154 C1orf226A1L170 272 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 TBC1D3BA6NDS4 549 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 TMEM247A6NEH6 219 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 JRKO75564 520 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 MYOGP15173 224 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 SLC35A2P78381 396 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 PPIGQ13427 754 aaKnown RBP eCLIP15.67■□□□□ 0.1
SLX4-202ENST00000466154 FAM20CQ8IXL6 584 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 LZICQ8WZA0 190 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 STARD8Q92502 1023 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 C7orf34Q96L11 122 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 BRF2Q9HAW0 419 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 ATAD3AQ9NVI7 634 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 IMPAD1Q9NX62 359 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 NDUFAF4Q9P032 175 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 INSL6Q9Y581 213 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 PCDHGB3Q9Y5G1 929 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 CD6P30203 668 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 SLC19A1P41440 591 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 CYP2A13Q16696 494 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 RGS21Q2M5E4 152 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 TRIM16LQ309B1 348 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 SPDYE7PQ495Y7 208 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 MSANTD1Q6ZTZ1 278 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 ZNF554Q86TJ5 538 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 C11orf74Q86VG3 221 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 TAMM41Q96BW9 452 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 MAFFQ9ULX9 164 aa15.67■□□□□ 0.1
SLX4-202ENST00000466154 GCM2O75603 506 aaPredicted RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 PCDH8O95206 1070 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 SELENOWP63302 87 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 CDK6Q00534 326 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 IL18R1Q13478 541 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PRSS53Q2L4Q9 553 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PAGE2Q7Z2X7 111 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 ZNF547Q8IVP9 402 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 VANGL1Q8TAA9 524 aaPredicted RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 COX4I2Q96KJ9 171 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 F2RL3Q96RI0 385 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 ZCCHC2Q9C0B9 1178 aaKnown RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 POLE4Q9NR33 117 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 GPR83Q9NYM4 423 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 NDRG4Q9ULP0 352 aaKnown RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 RNF6Q9Y252 685 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 FGBP02675 491 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PNLIPRP1P54315 467 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 TMIGD1Q6UXZ0 262 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 TSPYL5Q86VY4 417 aaPredicted RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 EXOSC8Q96B26 276 aaKnown RBP15.66■□□□□ 0.1
SLX4-202ENST00000466154 RSPRY1Q96DX4 576 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 FAM210AQ96ND0 272 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 SLC6A16Q9GZN6 736 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 ZNF556Q9HAH1 456 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 ACOT13Q9NPJ3 140 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 TAS2R16Q9NYV7 291 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 BTNL2Q9UIR0 455 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 SLC6A14Q9UN76 642 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PCDH17O14917 1159 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 TPST2O60704 377 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 PRNPP04156 253 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 EPHX1P07099 455 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 VEZF1Q14119 521 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 MPEG1Q2M385 716 aa15.66■□□□□ 0.1
SLX4-202ENST00000466154 IFI44LQ53G44 452 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms