RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 MSL3P1P0C860 447 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ZNF888P0CJ79 500 aaPredicted RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SMIM10L1P0DMW3 83 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 CCL4P13236 92 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 HSD3B1P14060 373 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TACR1P25103 407 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 HSD3B2P26439 372 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 GSTM2P28161 218 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SERPINB1P30740 379 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ETV5P41161 510 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ARFIP2P53365 341 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 RAB8AP61006 207 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 RPL38P63173 70 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ZNF33BQ06732 778 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.045e-6■■■■□ 21
NUDCD3-204ENST00000464812 TRA2AQ13595 282 aaKnown RBP eCLIP8.53□□□□□ -1.045e-10■■■■■ 34.7
NUDCD3-204ENST00000464812 ISXQ2M1V0 245 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TUBB8Q3ZCM7 444 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ZC3H12BQ5HYM0 836 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 C6orf136Q5SQH8 315 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 WASHC2DQ5SRD0 308 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 DEPDC1Q5TB30 811 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TMEM214Q6NUQ4 689 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ZNF793Q6ZN11 406 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 COMMD6Q7Z4G1 85 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 PDSS2Q86YH6 399 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 KIRREL3Q8IZU9 778 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 METTL4Q8N3J2 472 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TRPV3Q8NET8 790 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TTLQ8NG68 377 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 BCAS4Q8TDM0 211 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ACTRT2Q8TDY3 377 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 UTP15Q8TED0 518 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SLC13A3Q8WWT9 602 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 MS4A6EQ96DS6 147 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 THAP11Q96EK4 314 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 CMTM7Q96FZ5 175 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SMIM10Q96HG1 83 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 C17orf62Q9BQA9 187 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SIKE1Q9BRV8 207 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SPRTNQ9H040 489 aaPredicted RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 ZNF385DQ9H6B1 395 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 FGF21Q9NSA1 209 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 PSD3Q9NYI0 1048 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 PLCL2Q9UPR0 1127 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 APOBEC2Q9Y235 224 aaKnown RBP8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 DLGAP4Q9Y2H0 992 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 BOLA1Q9Y3E2 137 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 BSNQ9UPA5 3926 aa8.53□□□□□ -1.04
NUDCD3-204ENST00000464812 SEC16AO15027 2179 aa8.52□□□□□ -1.04
NUDCD3-204ENST00000464812 MGAQ8IWI9 3026 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TRABD2BA6NFA1 517 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 EFCAB7A8K855 629 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 NDUFAB1O14561 156 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 ERI3O43414 337 aaKnown RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TLX3O43711 291 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TMPRSS11DO60235 418 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 DNAJB6O75190 326 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 EEDO75530 441 aaKnown RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 SEMA3DO95025 777 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 MT-CO3P00414 261 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 LBPP18428 481 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 IL1RNP18510 177 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 SDC1P18827 310 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 ITIH1P19827 911 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 ITGAXP20702 1163 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 CERS1P27544 350 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TPP2P29144 1249 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TIA1P31483 386 aaKnown RBP eCLIP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 BSGP35613 385 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 ARL4DP49703 201 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 DIO3P55073 304 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 PHEXP78562 749 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 E2F1Q01094 437 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 PWP1Q13610 501 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 CUL3Q13618 768 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 DSG2Q14126 1118 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 AP5B1Q2VPB7 878 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 SPDYAQ5MJ70 313 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 NXNQ6DKJ4 435 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 OGFOD2Q6N063 350 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 ABHD17CQ6PCB6 329 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 UNQ6494/PRO21346Q6UXR6 183 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 MMP21Q8N119 569 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 TBC1D19Q8N5T2 526 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 METTL27Q8N6F8 245 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 GBP7Q8N8V2 638 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 OR2L5Q8NG80 312 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 OR8K5Q8NH50 307 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 CLHC1Q8NHS4 586 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 CHTF18Q8WVB6 975 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 GAL3ST3Q96A11 431 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 RERGQ96A58 199 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 SEC16BQ96JE7 1060 aa8.52□□□□□ -1.05
NUDCD3-204ENST00000464812 CATSPER2Q96P56 530 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms