RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 HSPA9P38646 679 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 MMP12P39900 470 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 NNMTP40261 264 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ETV5P41161 510 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 MAGEA4P43358 317 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ARCN1P48444 511 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 LMAN1P49257 510 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 GEMIN4P57678 1058 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PFN3P60673 137 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CCL7P80098 99 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 XIAPP98170 497 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 HOXA4Q00056 320 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CTBP1Q13363 440 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PEX6Q13608 980 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CUL1Q13616 776 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CRYMQ14894 314 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 UGP2Q16851 508 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 DEFB133Q30KQ1 61 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ZNF805Q5CZA5 627 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ARMC12Q5T9G4 340 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ALS2CLQ60I27 953 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 LRRC66Q68CR7 880 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FCRL6Q6DN72 434 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CAPRIN2Q6IMN6 1127 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 LVRNQ6Q4G3 990 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 KYAT3Q6YP21 454 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PPP1R21Q6ZMI0 780 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 Q6ZWC4 215 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 WDR53Q7Z5U6 358 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 HOOK3Q86VS8 718 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PARGQ86W56 976 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 DENND6AQ8IWF6 608 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 IFT20Q8IY31 132 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 PIANPQ8IYJ0 282 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 GPR26Q8NDV2 337 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 SSC4DQ8WTU2 575 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ASB12Q8WXK4 309 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 OR8D1Q8WZ84 308 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 C5orf34Q96MH7 638 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CATSPER2Q96P56 530 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FMO2Q99518 471 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 WRAP53Q9BUR4 548 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FSD1LQ9BXM9 530 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 SLC17A9Q9BYT1 436 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 STRADBQ9C0K7 418 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CLPBQ9H078 707 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CDH19Q9H159 772 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FAM96AQ9H5X1 160 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ZMAT3Q9HA38 289 aaKnown RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 ARFGAP3Q9NP61 516 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FZD3Q9NPG1 666 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 DONSONQ9NYP3 566 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-204ENST00000463622 MED16Q9Y2X0 877 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 FADS3Q9Y5Q0 445 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 NFS1Q9Y697 457 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM131Q92545 1883 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 CACNA1DQ01668 2161 aa3.51□□□□□ -1.85
SCFD1-204ENST00000463622 A0A088AWK7 358 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CXorf51AA0A1B0GTR3 108 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TCRBV9S1A1TA0A576 114 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CCDC162PA2VCL2 907 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 D6RAR5 112 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 AGPSO00116 658 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RIPK2O43353 540 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 AKAP10O43572 662 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SOCS5O75159 536 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MTX2O75431 263 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 DDAH2O95865 285 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ONECUT2O95948 504 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PAK4O96013 591 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FGF1P05230 155 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 NPSP0C0P6 89 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ERVK-10P10266 1014 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 UGT1A6P19224 532 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 HLA-DPA1P20036 260 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 UGT1A1P22309 533 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 UGT1A4P22310 534 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FOXN2P32314 431 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 UGT1A3P35503 534 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 DCTP40126 519 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 RABIFP47224 123 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 STC1P52823 247 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ARL4CP56559 192 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 MPP1Q00013 466 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PPARDQ03181 441 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ACVR1Q04771 509 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CCDC15Q0P6D6 951 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CDH17Q12864 832 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 CALCOCO2Q13137 446 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 SLC29A2Q14542 456 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PRPSAP1Q14558 356 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 PTCHD3Q3KNS1 767 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ANKRD20A4Q4UJ75 823 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 FHL5Q5TD97 284 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 STEAP4Q687X5 459 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 ERN2Q76MJ5 926 aaKnown RBP3.5□□□□□ -1.85
SCFD1-204ENST00000463622 DPPA4Q7L190 304 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TECPR1Q7Z6L1 1165 aa3.5□□□□□ -1.85
SCFD1-204ENST00000463622 TMEM135Q86UB9 458 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms