RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ATP6V0D1P61421 351 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 ACTN3Q08043 901 aaPredicted RBP19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 TUBA3CQ13748 450 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 TUBA3EQ6PEY2 450 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 FRA10AC1Q70Z53 315 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 CRLF3Q8IUI8 442 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 BEST3Q8N1M1 668 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 ARMC10Q8N2F6 343 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 SLC5A8Q8N695 610 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 UBXN10Q96LJ8 280 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 RBCK1Q9BYM8 510 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 KLHL31Q9H511 634 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 TEX15Q9BXT5 2789 aa19.29■□□□□ 0.68
PDLIM4-205ENST00000463615 TCRBV16S1A1N1A0A5B0 115 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 C4orf51C9J302 202 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 PRMT3O60678 531 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 H2AFYO75367 372 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 WDR47O94967 919 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 GP5P40197 560 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 RAB8AP61006 207 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 STXBP1P61764 594 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 OLR1P78380 273 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 MRPS25P82663 173 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 CAV1Q03135 178 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 RBBP5Q15291 538 aaKnown RBP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 ADPRMQ3LIE5 342 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 ZNF766Q5HY98 468 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 TMIGD1Q6UXZ0 262 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 GAL3ST3Q96A11 431 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 WDR34Q96EX3 536 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 SCMH1Q96GD3 660 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 PTCHD1Q96NR3 888 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 NPLQ9BXD5 320 aaPredicted RBP19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 DPH5Q9H2P9 285 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 PRDM9Q9NQV7 894 aa19.28■□□□□ 0.68
PDLIM4-205ENST00000463615 TAPBPO15533 448 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 B4GALT2O60909 372 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CLEC3AO75596 197 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 PIAS1O75925 651 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CD1DP15813 335 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 STMN1P16949 149 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 MST1P26927 711 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CD96P40200 585 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 GDF5P43026 501 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 TAS2R50P59544 299 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 GPX6P59796 221 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 E2F2Q14209 437 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 ZRSR2Q15696 482 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 C18orf21Q32NC0 220 aaPredicted RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 SULT1C3Q6IMI6 304 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CAPN12Q6ZSI9 719 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 C3orf62Q6ZUJ4 267 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 ZNF572Q7Z3I7 529 aaPredicted RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 KRT78Q8N1N4 520 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CA13Q8N1Q1 262 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 PDPRQ8NCN5 879 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 NFAM1Q8NET5 270 aaPredicted RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 UTP23Q9BRU9 249 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 TMEM79Q9BSE2 394 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 TRIM45Q9H8W5 580 aaPredicted RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 CNOT10Q9H9A5 744 aaKnown RBP19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 TXNDC16Q9P2K2 825 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 MMACHCQ9Y4U1 282 aa19.27■□□□□ 0.68
PDLIM4-205ENST00000463615 ASPDHA6ND91 283 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 LRIT2A6NDA9 550 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 SAGE2PA6NJ88 616 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 TBX6O95947 436 aaPredicted RBP19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 CCDC166P0CW27 439 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 ETF1P62495 437 aaKnown RBP19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 BTG2P78543 158 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 SLBPQ14493 270 aaKnown RBP eCLIP19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 TERF2Q15554 542 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 TOR1AIP1Q5JTV8 583 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 FCRLBQ6BAA4 426 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 GPSM1Q86YR5 675 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 KIAA1191Q96A73 305 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 MS4A6EQ96DS6 147 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 SIGLEC12Q96PQ1 595 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 CAB39LQ9H9S4 337 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 DNAJC11Q9NVH1 559 aa19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 PTBP2Q9UKA9 531 aaKnown RBP19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 PPIEQ9UNP9 301 aaKnown RBP19.26■□□□□ 0.67
PDLIM4-205ENST00000463615 PSMD12O00232 456 aaPredicted RBP19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 PHGDHO43175 533 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 MAN1A2O60476 641 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 PRAMEF4O60810 478 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 HNRNPH1P31943 449 aaKnown RBP19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 HPDP32754 393 aaPredicted RBP19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 SPRP35270 261 aaPredicted RBP19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 DCTP40126 519 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 HNF4AP41235 474 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 KCNK10P57789 538 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 RAB10P61026 200 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 OR1C1Q15619 314 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 GRTP1Q5TC63 336 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 PRAMEF9Q5VWM5 478 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 GFRALQ6UXV0 394 aa19.25■□□□□ 0.67
PDLIM4-205ENST00000463615 RPS19BP1Q86WX3 136 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms