RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TAPBPO15533 448 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 CD1DP15813 335 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 STMN1P16949 149 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 GGT5P36269 586 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 TDGF1P3P51864 188 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 ATP6V0D1P61421 351 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 CAV1Q03135 178 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 TOR1AIP1Q5JTV8 583 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 CDKL4Q5MAI5 379 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 SYT10Q6XYQ8 523 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 QSOX2Q6ZRP7 698 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 GPSM1Q86YR5 675 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.8■□□□□ 0.44
VARS-220ENST00000461874 BEST3Q8N1M1 668 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 TCAIMQ8N3R3 496 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 TTLQ8NG68 377 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 NPAS2Q99743 824 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 TMEM79Q9BSE2 394 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 GPRC5BQ9NZH0 403 aa17.8■□□□□ 0.44
VARS-220ENST00000461874 DIDO1Q9BTC0 2240 aaKnown RBP17.79■□□□□ 0.44
VARS-220ENST00000461874 PRMT3O60678 531 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 RASAL1O95294 804 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 CLDN1O95832 211 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 RNH1P13489 461 aaKnown RBP17.79■□□□□ 0.44
VARS-220ENST00000461874 SLC26A5P58743 744 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 BTG2P78543 158 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 SLBPQ14493 270 aaKnown RBP eCLIP17.79■□□□□ 0.44
VARS-220ENST00000461874 OR4D1Q15615 310 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 TRADDQ15628 312 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 ZKSCAN8Q15776 578 aaPredicted RBP17.79■□□□□ 0.44
VARS-220ENST00000461874 MEP1AQ16819 746 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 TMIGD1Q6UXZ0 262 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 MAMDC2Q7Z304 686 aaPredicted RBP17.79■□□□□ 0.44
VARS-220ENST00000461874 CRLF3Q8IUI8 442 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 CTAGE3PQ8IX95 158 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 DNAJB8Q8NHS0 232 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 FBXO25Q8TCJ0 367 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 UBXN10Q96LJ8 280 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 PTCHD1Q96NR3 888 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 RAB17Q9H0T7 212 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 CNOT10Q9H9A5 744 aaKnown RBP17.79■□□□□ 0.44
VARS-220ENST00000461874 WWOXQ9NZC7 414 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 ABI3Q9P2A4 366 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 COPG2Q9UBF2 871 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 CPAMD8Q8IZJ3 1885 aa17.79■□□□□ 0.44
VARS-220ENST00000461874 FAM227AF5H4B4 570 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 PSMD12O00232 456 aaPredicted RBP17.78■□□□□ 0.44
VARS-220ENST00000461874 LRRTM2O43300 516 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 MAN1A2O60476 641 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 GSTM2P28161 218 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 SPRP35270 261 aaPredicted RBP17.78■□□□□ 0.44
VARS-220ENST00000461874 MAGEA4P43358 317 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 RAB10P61026 200 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 STXBP1P61764 594 aaKnown RBP17.78■□□□□ 0.44
VARS-220ENST00000461874 BTN3A2P78410 334 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 TUBA3CQ13748 450 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 KBTBD12Q3ZCT8 623 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 ZNF766Q5HY98 468 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 GRTP1Q5TC63 336 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 SULT1C3Q6IMI6 304 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 TUBA3EQ6PEY2 450 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 ZDHHC24Q6UX98 284 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 ZNF572Q7Z3I7 529 aaPredicted RBP17.78■□□□□ 0.44
VARS-220ENST00000461874 KRT78Q8N1N4 520 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 CA13Q8N1Q1 262 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 SLC5A8Q8N695 610 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 ELP5Q8TE02 316 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 KIAA1191Q96A73 305 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 SEC16BQ96JE7 1060 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 PITHD1Q9GZP4 211 aaPredicted RBP17.78■□□□□ 0.44
VARS-220ENST00000461874 RHBGQ9H310 441 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 EHD1Q9H4M9 534 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 NT5DC2Q9H857 520 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 DNAJC11Q9NVH1 559 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 PCDHGB6Q9Y5F9 930 aa17.78■□□□□ 0.44
VARS-220ENST00000461874 IGKV3D-11A0A0A0MRZ8 115 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 LRIT2A6NDA9 550 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 PRAMEF4O60810 478 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 STK16O75716 305 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 CRYABP02511 175 aaKnown RBP17.77■□□□□ 0.44
VARS-220ENST00000461874 STSP08842 583 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 MAOAP21397 527 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 CD96P40200 585 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 HSPA7P48741 367 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 TAS2R50P59544 299 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 FBXO48Q5FWF7 155 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 PRAMEF9Q5VWM5 478 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 CCDC25Q86WR0 208 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 CYP4X1Q8N118 509 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 LGI4Q8N135 537 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 PPM1NQ8N819 430 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 MDS2Q8NDY4 140 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 GAL3ST3Q96A11 431 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 ESAMQ96AP7 390 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 MS4A6EQ96DS6 147 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 UTP23Q9BRU9 249 aaKnown RBP17.77■□□□□ 0.44
VARS-220ENST00000461874 PRDM9Q9NQV7 894 aa17.77■□□□□ 0.44
VARS-220ENST00000461874 PTBP2Q9UKA9 531 aaKnown RBP17.77■□□□□ 0.44
VARS-220ENST00000461874 TCRBV16S1A1N1A0A5B0 115 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms