RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 IGKV3D-11A0A0A0MRZ8 115 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 A0A1B0GUH1 482 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TCRBV9S1A1TA0A576 114 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF860A6NHJ4 632 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 FAM159BA6NKW6 160 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CXorf49A8MYA2 514 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TAPBPO15533 448 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 LRRTM2O43300 516 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 RAD51CO43502 376 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 PRMT3O60678 531 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 RASAL1O95294 804 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CRYABP02511 175 aaKnown RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SERPIND1P05546 499 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF888P0CJ79 500 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SSTR1P30872 391 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CD96P40200 585 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SLC12A2P55011 1212 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 PER3P56645 1201 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 OR4D2P58180 307 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SLC26A5P58743 744 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ATP6V0D1P61421 351 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 MRPS25P82663 173 aaKnown RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CAV1Q03135 178 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF33BQ06732 778 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ACTN3Q08043 901 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TGFBIQ15582 683 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ZKSCAN8Q15776 578 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 HIST2H2BCQ6DN03 193 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 QSOX2Q6ZRP7 698 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 C3orf62Q6ZUJ4 267 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TMPRSS11BQ86T26 416 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CRLF3Q8IUI8 442 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 MDS2Q8NDY4 140 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TTLQ8NG68 377 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SUN3Q8TAQ9 357 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CDKL2Q92772 493 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TSLPQ969D9 159 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 WDR34Q96EX3 536 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TSPAN17Q96FV3 270 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TSNARE1Q96NA8 513 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 GPR22Q99680 433 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 RBBP8Q99708 897 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 NPAS2Q99743 824 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 CPNE1Q99829 537 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 EGFL8Q99944 293 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 NPLQ9BXD5 320 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 AICDAQ9GZX7 198 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 EHD1Q9H4M9 534 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 KLHL31Q9H511 634 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TRIM45Q9H8W5 580 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 KCNK13Q9HB14 408 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 SAYSD1Q9NPB0 183 aa8.6□□□□□ -1.03
BRCA1-207ENST00000461798 RYDENQ9NUL5 291 aaKnown RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
BRCA1-207ENST00000461798 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 A1L4Q6 167 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 LRIT2A6NDA9 550 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 B4GALT2O60909 372 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CLEC3AO75596 197 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CDC123O75794 336 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PIAS1O75925 651 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TBX6O95947 436 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 B3GALT4O96024 378 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 F10P00742 488 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 UQCRHP07919 91 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CCDC166P0CW27 439 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 RNH1P13489 461 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CD1DP15813 335 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 STMN1P16949 149 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 MST1P26927 711 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GP5P40197 560 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GDF5P43026 501 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TAS2R50P59544 299 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GPX6P59796 221 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 RAB8AP61006 207 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 STXBP1P61764 594 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 ETF1P62495 437 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 OLR1P78380 273 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 BTG2P78543 158 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GUCY2DQ02846 1103 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 PCDH1Q08174 1060 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 E2F2Q14209 437 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 RBBP5Q15291 538 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 C18orf21Q32NC0 220 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 ADPRMQ3LIE5 342 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF766Q5HY98 468 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GRTP1Q5TC63 336 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 SULT1C3Q6IMI6 304 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TUBA3EQ6PEY2 450 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 TMIGD1Q6UXZ0 262 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 FRA10AC1Q70Z53 315 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF572Q7Z3I7 529 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 RPS19BP1Q86WX3 136 aaKnown RBP8.59□□□□□ -1.03
BRCA1-207ENST00000461798 GPSM1Q86YR5 675 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 BEST3Q8N1M1 668 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 CA13Q8N1Q1 262 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
BRCA1-207ENST00000461798 NFAM1Q8NET5 270 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms