RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CSNK1DP48730 415 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 FAM214AQ32MH5 1076 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RUNDC3AQ59EK9 446 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 LYSMD2Q8IV50 215 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF784Q8NCA9 323 aaPredicted RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RBM4BQ9BQ04 359 aaKnown RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RBM4Q9BWF3 364 aaKnown RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 KCNH6Q9H252 994 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 CLMPQ9H6B4 373 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SLC22A1O15245 554 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 UPK1BO75841 260 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 CD9P21926 228 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SEC13P55735 322 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 SLC16A12Q6ZSM3 486 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 FAM124AQ86V42 546 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 LSMEM1Q8N8F7 131 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF557Q8N988 423 aaPredicted RBP14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF740Q8NDX6 193 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 OR7G3Q8NG95 312 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 CNIH3Q8TBE1 160 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 FKBP10Q96AY3 582 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 NUS1Q96E22 293 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 PYURFQ96I23 114 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 RDH14Q9HBH5 336 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 TMPRSS11EQ9UL52 423 aa14.82□□□□□ -0.04
LMNB1-203ENST00000460265 ACOX3O15254 700 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SUV39H1O43463 412 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CTSLP07711 333 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CRHBPP24387 322 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 GPC1P35052 558 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PTGS2P35354 604 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 MESP2Q0VG99 397 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CDONQ4KMG0 1287 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 STEAP3Q658P3 488 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 LILRA6Q6PI73 481 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SPRED1Q7Z699 444 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ISG20Q96AZ6 181 aaKnown RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PPCDCQ96CD2 204 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 MAP6Q96JE9 813 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 NODALQ96S42 347 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 DSN1Q9H410 356 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SCN3BQ9NY72 215 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PPT2Q9UMR5 302 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SAMD4AQ9UPU9 718 aaKnown RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ISPDA4D126 451 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 MEN1O00255 615 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 BCKDKO14874 412 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PAK4O96013 591 aaPredicted RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 C7P10643 843 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 AMD1P17707 334 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 AGXTP21549 392 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 NRIP1P48552 1158 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 OR2B6P58173 313 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 TBPL1P62380 186 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 GALK2Q01415 458 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SRSF11Q05519 484 aaKnown RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CDK10Q15131 360 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CTF1Q16619 201 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 DUOXA1Q1HG43 343 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ATAD3CQ5T2N8 411 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 GPR153Q6NV75 609 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 C8orf82Q6P1X6 216 aaPredicted RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 TRIM46Q7Z4K8 759 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 TRAM1L1Q8N609 369 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF540Q8NDQ6 660 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF548Q8NEK5 533 aaPredicted RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 GRPEL2Q8TAA5 225 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 JPH3Q8WXH2 748 aaPredicted RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SNX18Q96RF0 628 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 SORBS1Q9BX66 1292 aaKnown RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CARS2Q9HA77 564 aaKnown RBP14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PLSCR3Q9NRY6 295 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 KRT84Q9NSB2 600 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 TRPC4Q9UBN4 977 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 PMF1-BGLAPU3KQ54 211 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 CDH23Q9H251 3354 aa14.81□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF99A8MXY4 864 aaPredicted RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FAM25AB3EWG3 89 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FAM25CB3EWG5 89 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FAM25GB3EWG6 89 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 QSOX1O00391 747 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 TAS2R50P59544 299 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 DEFA1P59665 94 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 DEFA3P59666 94 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 NCS1P62166 190 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 ABHD18Q0P651 414 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FXNQ16595 210 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 ADPRMQ3LIE5 342 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PSRC1Q6PGN9 363 aaPredicted RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PTRH1Q86Y79 214 aaKnown RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 C10orf111Q8N326 155 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 CELF2-AS1Q8N7Q2 184 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 KAT8Q9H7Z6 458 aaKnown RBP14.8□□□□□ -0.04
LMNB1-203ENST00000460265 MAU2Q9Y6X3 613 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 FAM20BO75063 409 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PTPN5P54829 565 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PFN3P60673 137 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 PPIGQ13427 754 aaKnown RBP eCLIP14.8□□□□□ -0.042e-6■■□□□ 11.4
LMNB1-203ENST00000460265 DMC1Q14565 340 aa14.8□□□□□ -0.04
LMNB1-203ENST00000460265 NKG7Q16617 165 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms