RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RASSF4Q9H2L5 321 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 TUBB1Q9H4B7 451 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 REEP4Q9H6H4 257 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRIM45Q9H8W5 580 aaPredicted RBP5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 CLK4Q9HAZ1 481 aaKnown RBP5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 IL1RL2Q9HB29 575 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 C3orf14Q9HBI5 128 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM74BQ9NUR3 256 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 CUEDC1Q9NWM3 386 aaPredicted RBP5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 NDOR1Q9UHB4 597 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 BAIAP2L1Q9UHR4 511 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF225Q9UK10 706 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 POMT2Q9UKY4 750 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 VPS4AQ9UN37 437 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 PCDHGA4Q9Y5G9 962 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 GPR45Q9Y5Y3 372 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 PTGDR2Q9Y5Y4 395 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 TNRC18O15417 2968 aaPredicted RBP5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 SDK1Q7Z5N4 2213 aa5.58□□□□□ -1.52
RNU1-88P-201ENST00000459274 TECTAO75443 2155 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SNRNP200O75643 2136 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SCN2AQ99250 2005 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRSS51A0A1B0GVH4 220 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 A0A1W2PPV9 198 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR2A25A4D2G3 310 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 KRT87PA6NCN2 255 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRIT2A6NDA9 550 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC9B1P1A6NJY1 282 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 A8MU76 341 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 C10orf142B7Z368 130 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 GSC2O15499 205 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SIGLEC6O43699 453 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRICKLE3O43900 615 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 NOBOXO60393 691 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRP3O75074 770 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 EEDO75530 441 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR2B3O76000 313 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SOX30O94993 753 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRATO95237 230 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CPSF4O95639 269 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 KRT75O95678 551 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 EML2O95834 649 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 IFNA14P01570 189 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 JUNP05412 331 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CELA2BP08218 269 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM58BPP0C7Q3 252 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRR35P0CG20 571 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TDGF1P13385 188 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 HOXB6P17509 224 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CKMT2P17540 419 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ALOX12P18054 663 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 EPORP19235 508 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ITGAXP20702 1163 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ALAS2P22557 587 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ME2P23368 584 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRPC1P48995 793 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PRIM2P49643 509 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SEPHS1P49903 392 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CORO7P57737 925 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR1D5P58170 312 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 VSX2P58304 361 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TAS2R50P59544 299 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PSME3P61289 254 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLAMF1Q13291 335 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TUBB3Q13509 450 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 E2F2Q14209 437 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 GNA13Q14344 377 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 HKDC1Q2TB90 917 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TRMT5Q32P41 509 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TIGD2Q4W5G0 525 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 WASHC2DQ5SRD0 308 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PHF19Q5T6S3 580 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM164Q5U3C3 297 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PEAR1Q5VY43 1037 aaPredicted RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 REP15Q6BDI9 236 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 TMEM71Q6P5X7 295 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 GALNT18Q6P9A2 607 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 FOXR1Q6PIV2 292 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 HACD2Q6Y1H2 254 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 RINLQ6ZS11 566 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 GK5Q6ZS86 529 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 ZNF621Q6ZSS3 439 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PAQR7Q86WK9 346 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 MCATQ8IVS2 390 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SLC25A45Q8N413 288 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CSNK1A1LQ8N752 337 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM181AQ8N9Y4 354 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR4A15Q8NGL6 344 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR2T11Q8NH01 316 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 OR8K5Q8NH50 307 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 NT5CQ8TCD5 201 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 PROKR1Q8TCW9 393 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 SAP25Q8TEE9 199 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 RSC1A1Q92681 617 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 GFM2Q969S9 779 aaKnown RBP5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 CCDC74AQ96AQ1 378 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 LRRC58Q96CX6 371 aa5.57□□□□□ -1.52
RNU1-88P-201ENST00000459274 FAM120BQ96EK7 910 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms