RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 SEMA3DO95025 777 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 DIRAS1O95057 198 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 KRT75O95678 551 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 OCM2P0CE71 109 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 GABRB1P18505 474 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ITGB7P26010 798 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 EPHA2P29317 976 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PDHA2P29803 388 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 SERPINB1P30740 379 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RRM2P31350 389 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 GSTM5P46439 218 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 BCAP31P51572 246 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 MAPK10P53779 464 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 HBA1P69905 142 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TAP2Q03519 686 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RPA4Q13156 261 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 PPIGQ13427 754 aaKnown RBP eCLIP12.01□□□□□ -0.498e-6■■■■□ 22.7
ECHDC1-209ENST00000454591 SLBPQ14493 270 aaKnown RBP eCLIP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 EIF4HQ15056 248 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 OXA1LQ15070 435 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 MICAQ29983 383 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TRIM40Q6P9F5 258 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TMPRSS11BQ86T26 416 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 SLCO6A1Q86UG4 719 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ARMC8Q8IUR7 673 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 EGFL6Q8IUX8 553 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RBM12BQ8IXT5 1001 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 DEPDC4Q8N2C3 294 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ZNF513Q8N8E2 541 aaPredicted RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 MRPL43Q8N983 215 aaKnown RBP12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 VN1R2Q8NFZ6 395 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 MYDGFQ969H8 173 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 FAM210AQ96ND0 272 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RHBDL2Q9NX52 303 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 TAS2R9Q9NYW1 312 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 LMCD1Q9NZU5 365 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 OSGIN1Q9UJX0 560 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 RNF6Q9Y252 685 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
ECHDC1-209ENST00000454591 CENPFP49454 3210 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 FUOMA2VDF0 154 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 J3QRK9 145 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 M0R3G1 203 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 TNFRSF11BO00300 401 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 VEGFDO43915 354 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 FUCA1P04066 466 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 CYP4B1P13584 511 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 HLA-EP13747 358 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 MAP2K4P45985 399 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 XCR1P46094 333 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 LIMK1P53667 647 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 SCARB2Q14108 478 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 IRF3Q14653 427 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 LAPTM4AQ15012 233 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 MPEG1Q2M385 716 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 FBXO43Q4G163 708 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 PLPP4Q5VZY2 271 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 ADNP2Q6IQ32 1131 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 TUBA3EQ6PEY2 450 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 GALNT10Q86SR1 603 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 FAM129CQ86XR2 697 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 PHF6Q8IWS0 365 aaKnown RBP eCLIP12□□□□□ -0.49
ECHDC1-209ENST00000454591 DNAJC22Q8N4W6 341 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 OR10G2Q8NGC3 310 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 OR2L2Q8NH16 312 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 CYB5D2Q8WUJ1 264 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 SLC5A11Q8WWX8 675 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 GEMIN6Q8WXD5 167 aaKnown RBP12□□□□□ -0.49
ECHDC1-209ENST00000454591 DNASE1L2Q92874 299 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 TAMM41Q96BW9 452 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 PPCDCQ96CD2 204 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 TPD52L3Q96J77 140 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 SLC35A5Q9BS91 424 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 ITPAQ9BY32 194 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
ECHDC1-209ENST00000454591 RHBGQ9H310 441 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 NT5DC2Q9H857 520 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 TRIM39Q9HCM9 518 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 SH3BP4Q9P0V3 963 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 KCND3Q9UK17 655 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 SH3GLB1Q9Y371 365 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 PMF1-BGLAPU3KQ54 211 aa12□□□□□ -0.49
ECHDC1-209ENST00000454591 CLCA1A8K7I4 914 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 CDK1P06493 297 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 HNRNPCP07910 306 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■□□□□ 11
ECHDC1-209ENST00000454591 ALOX5P09917 674 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 CSF2RAP15509 400 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 PORP16435 677 aaPredicted RBP11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 DDX5P17844 614 aaKnown RBP11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 FSHRP23945 695 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 DGKGP49619 791 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 ARHGAP19Q14CB8 494 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 DHCR24Q15392 516 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 COX20Q5RI15 118 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 CATSPEREQ5SY80 951 aa11.99□□□□□ -0.49
ECHDC1-209ENST00000454591 OTOP2Q7RTS6 562 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms