RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 ANKHD1Q8IWZ3 2542 aaKnown RBP13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 NKX2-6A6NCS4 301 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 FAM90A27PA6NNH2 459 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CHST10O43529 356 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CEP104O60308 925 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 STATHP02808 62 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 ZSCAN5DPP0CG00 497 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 RNH1P13489 461 aaKnown RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 AP1S2P56377 157 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CUL1Q13616 776 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 PRUNE1Q86TP1 453 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 APCDD1LQ8NCL9 501 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 OR5T3Q8NGG3 340 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 GABPB2Q8TAK5 448 aaPredicted RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 GPR21Q99679 349 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 ZDHHC11Q9H8X9 412 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 YARS2Q9Y2Z4 477 aaKnown RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 CAPN6Q9Y6Q1 641 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 INTS1Q8N201 2190 aaKnown RBP13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 NAV3Q8IVL0 2385 aa13.34□□□□□ -0.27
LYSMD3-202ENST00000453259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 PABPN1LA6NDY0 278 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF860A6NHJ4 632 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 LCMT2O60294 686 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 DIAPH2O60879 1101 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 AVILO75366 819 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ITGA10O75578 1167 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 CDH1P12830 882 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 NPPBP16860 134 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 KLK2P20151 261 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 HIST1H2ADP20671 130 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ACVR2AP27037 513 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 SSR4P51571 173 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 PMPCAQ10713 525 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 SLC25A35Q3KQZ1 300 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 EMC4Q5J8M3 183 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 NDUFAF5Q5TEU4 345 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 DUPD1Q68J44 220 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 CASC4Q6P4E1 433 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF549Q6P9A3 640 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 PIWIL4Q7Z3Z4 852 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 SLC22A16Q86VW1 577 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 TRPV3Q8NET8 790 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 OR5M3Q8NGP4 307 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ATL1Q8WXF7 558 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 VMP1Q96GC9 406 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 ALPK1Q96QP1 1244 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 BAG1Q99933 345 aaPredicted RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 CCDC77Q9BR77 488 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 XAB2Q9HCS7 855 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 TRMT6Q9UJA5 497 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 HRH3Q9Y5N1 445 aa13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 PHF3Q92576 2039 aaKnown RBP13.33□□□□□ -0.28
LYSMD3-202ENST00000453259 SDR42E2A6NKP2 422 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 OR1F1O43749 312 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 B4GALT2O60909 372 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 CTAG2O75638 210 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 NUP107P57740 925 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 NAE1Q13564 534 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 SIX1Q15475 284 aaPredicted RBP13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 B3GNT6Q6ZMB0 384 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 GK5Q6ZS86 529 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 SHISA5Q8N114 240 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 PSD4Q8NDX1 1056 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 AARSD1Q9BTE6 412 aaKnown RBP13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 UCK2Q9BZX2 261 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 DNAJB12Q9NXW2 375 aaKnown RBP13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 B4GALT7Q9UBV7 327 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 SH2B3Q9UQQ2 575 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 L3MBTL1Q9Y468 752 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
LYSMD3-202ENST00000453259 TRBV11-1A0A0K0K1C0 115 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ZCWPW2A0A1B0GU75 182 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 A0A1B0GVC2 190 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 A8MVJ9 347 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 WDR1O75083 606 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 IGHG3P01860 377 aa13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 ZNF888P0CJ79 500 aaPredicted RBP13.31□□□□□ -0.28
LYSMD3-202ENST00000453259 DRD2P14416 443 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms