RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 OSBPL10Q9BXB5 764 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 ASPSCR1Q9BZE9 553 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
VTA1-203ENST00000452973 DDX18Q9NVP1 670 aaKnown RBP11.27□□□□□ -0.61
VTA1-203ENST00000452973 RNASET2O00584 256 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 FABP3P05413 133 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 C7P10643 843 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 IL7RP16871 459 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 CTHP32929 405 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 RPS26P62854 115 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 SLC5A12Q1EHB4 618 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 KHDRBS2Q5VWX1 349 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 TMEM26Q6ZUK4 368 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 R3HCC1LQ7Z5L2 792 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 ARL10Q8N8L6 244 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 ZNF555Q8NEP9 628 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.26□□□□□ -0.61
VTA1-203ENST00000452973 CAMK1GQ96NX5 476 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 RBM4BQ9BQ04 359 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 APOOQ9BUR5 198 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 RBM4Q9BWF3 364 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 AMBRA1Q9C0C7 1298 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 BHLHE41Q9C0J9 482 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 LIN28AQ9H9Z2 209 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 GPATCH2Q9NW75 528 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 FAM118AQ9NWS6 357 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 NDUFA13Q9P0J0 144 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 ZNF282Q9UDV7 671 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 RPS6KA6Q9UK32 745 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 ACSL5Q9ULC5 683 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 HEATR5BQ9P2D3 2071 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 A0A1W2PPV9 198 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 WASHC1A8K0Z3 465 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 KIF1CO43896 1103 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 TBX6O95947 436 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 HOXB3P14651 431 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 PCSK2P16519 638 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 TNFRSF4P43489 277 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 OR1E2P47887 323 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 TFF2Q03403 129 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 SIM2Q14190 667 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 NEDD8Q15843 81 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 OR2T5Q6IEZ7 315 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 ERICH5Q6P6B1 374 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 WASH2PQ6VEQ5 465 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 OR2T29Q8NH02 315 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 OR5K1Q8NHB7 308 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 EXOSC8Q96B26 276 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 MENTQ9BUN1 341 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 MAGIXQ9H6Y5 334 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 FGF22Q9HCT0 170 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 ATP6V1HQ9UI12 483 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 PLXND1Q9Y4D7 1925 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 A0A087WXM4 84 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 A0A1W2PQF6 199 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 ACADMP11310 421 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 AK4P27144 223 aaPredicted RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 PTGER1P34995 402 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 PPP2R2BQ00005 443 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 MEP1AQ16819 746 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 DEPDC1Q5TB30 811 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
VTA1-203ENST00000452973 SYNPOQ8N3V7 929 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 SVOPLQ8N434 492 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 AMER3Q8N944 861 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 TMEM145Q8NBT3 493 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 C11orf65Q8NCR3 313 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 OR52E4Q8NGH9 312 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 NFKBIDQ8NI38 313 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 UCN3Q969E3 161 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 MPP4Q96JB8 637 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 C17orf62Q9BQA9 187 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 MYNNQ9NPC7 610 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 AHSPQ9NZD4 102 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 TAAR2Q9P1P5 351 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 AASSQ9UDR5 926 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 SAMHD1Q9Y3Z3 626 aaKnown RBP11.26□□□□□ -0.61
VTA1-203ENST00000452973 ORC6Q9Y5N6 252 aa11.26□□□□□ -0.61
VTA1-203ENST00000452973 GLOD5A6NK44 160 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 H3BQ06 376 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 SUV39H1O43463 412 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 PLRG1O43660 514 aaKnown RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 GPR37L1O60883 481 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 FESP07332 822 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 ARHGDIAP52565 204 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 C21orf58P58505 322 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 HSPB3Q12988 150 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 ENPP7Q6UWV6 458 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 ADGRF3Q8IZF5 1079 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 C8orf59Q8N0T1 100 aaPredicted RBP11.25□□□□□ -0.61
VTA1-203ENST00000452973 RAB42Q8N4Z0 105 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 SGCDQ92629 289 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 MBOAT4Q96T53 435 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 BTBD1Q9H0C5 482 aa11.25□□□□□ -0.61
VTA1-203ENST00000452973 RIBC2Q9H4K1 309 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms